Calcium in PDB 5g49: Crystal Structure of the Arabodopsis Thaliana Histone-Fold Dimer L1L Nf-YC3

The structure of Crystal Structure of the Arabodopsis Thaliana Histone-Fold Dimer L1L Nf-YC3, PDB code: 5g49 was solved by N.Gnesutta, D.Saad, A.Chaves-Sanjuan, R.Mantovani, M.Nardini, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.85 / 2.30
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	68.344, 81.691, 95.998, 90.00, 90.00, 90.00
R / Rfree (%)	16.2 / 20

The binding sites of Calcium atom in the Crystal Structure of the Arabodopsis Thaliana Histone-Fold Dimer L1L Nf-YC3 (pdb code 5g49). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of the Arabodopsis Thaliana Histone-Fold Dimer L1L Nf-YC3, PDB code: 5g49:

Calcium binding site 1 out of 1 in the Crystal Structure of the Arabodopsis Thaliana Histone-Fold Dimer L1L Nf-YC3


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Arabodopsis Thaliana Histone-Fold Dimer L1L Nf-YC3 within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca1149 b:66.4 occ:1.00 O B:HOH2037 2.3 58.4 1.0 O B:HOH2039 2.5 64.6 1.0 O B:HOH2033 2.6 54.6 1.0 OD2 B:ASP137 2.7 54.9 1.0 O B:HOH2032 2.7 40.6 1.0 O B:HOH2038 3.1 70.2 1.0 CG B:ASP137 3.6 41.9 1.0 CB B:ASP137 3.7 37.2 1.0 O B:HOH2034 3.9 65.4 1.0 OD1 B:ASP137 4.8 43.8 1.0 O B:HOH2029 4.9 39.2 1.0

N.Gnesutta, D.Saad, A.Chaves-Sanjuan, R.Mantovani, M.Nardini. Crystal Structure of the Arabidopsis Thaliana L1L/Nf-YC3 Histone-Fold Dimer Reveals Specificities of the LEC1 Family of Nf-Y Subunits in Plants. Mol Plant V. 10 645 2017.
ISSN: ESSN 1752-9867
PubMed: 27871811
DOI: 10.1016/J.MOLP.2016.11.006