Calcium in PDB 5gjv: Structure of the Mammalian Voltage-Gated Calcium Channel CAV1.1 Complex at Near Atomic Resolution

The binding sites of Calcium atom in the Structure of the Mammalian Voltage-Gated Calcium Channel CAV1.1 Complex at Near Atomic Resolution (pdb code 5gjv). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 3 binding sites of Calcium where determined in the Structure of the Mammalian Voltage-Gated Calcium Channel CAV1.1 Complex at Near Atomic Resolution, PDB code: 5gjv:
Jump to Calcium binding site number: 1; 2; 3;

Calcium binding site 1 out of 3 in the Structure of the Mammalian Voltage-Gated Calcium Channel CAV1.1 Complex at Near Atomic Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of the Mammalian Voltage-Gated Calcium Channel CAV1.1 Complex at Near Atomic Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1916 b:30.0 occ:1.00 OE2 A:GLU292 3.0 0.0 1.0 OE1 A:GLU614 3.2 55.6 1.0 OE1 A:GLU1014 3.2 0.6 1.0 O A:GLY1322 4.0 53.1 1.0 OE1 A:GLU1323 4.1 0.7 1.0 CA A:CA1917 4.2 30.0 1.0 CD A:GLU292 4.2 0.3 1.0 CD A:GLU1014 4.3 0.5 1.0 CD A:GLU614 4.4 55.1 1.0 O A:PHE1013 4.7 71.6 1.0 C A:GLY1322 4.7 54.1 1.0 N A:ALA1324 4.8 47.5 1.0 CB A:GLU1014 4.8 76.3 1.0 CA A:GLU1323 4.8 54.3 1.0 CG A:GLU1014 4.9 0.3 1.0 CA A:GLU614 4.9 41.3 1.0 O A:MET291 5.0 53.2 1.0 CB A:GLU292 5.0 77.9 1.0 CG A:GLU292 5.0 0.9 1.0 OE2 A:GLU614 5.0 61.4 1.0

Calcium binding site 2 out of 3 in the Structure of the Mammalian Voltage-Gated Calcium Channel CAV1.1 Complex at Near Atomic Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Structure of the Mammalian Voltage-Gated Calcium Channel CAV1.1 Complex at Near Atomic Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1917 b:30.0 occ:1.00 C2I A:PC11910 3.6 20.0 1.0 CA A:CA1916 4.2 30.0 1.0 C3C A:PC11907 4.6 20.0 1.0 O A:THR612 4.8 29.5 1.0 C2H A:PC11910 4.8 20.0 1.0 O A:GLY613 4.8 35.3 1.0 C A:GLY613 4.8 34.4 1.0 O A:PHE1013 5.0 71.6 1.0 C3I A:PC11908 5.0 20.0 1.0

Calcium binding site 3 out of 3 in the Structure of the Mammalian Voltage-Gated Calcium Channel CAV1.1 Complex at Near Atomic Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Structure of the Mammalian Voltage-Gated Calcium Channel CAV1.1 Complex at Near Atomic Resolution within 5.0Å range: probe atom residue distance (Å) B Occ F:Ca1225 b:30.0 occ:1.00 OG F:SER265 2.5 37.4 1.0 CB F:SER265 3.4 37.3 1.0 O F:GLY366 3.6 82.0 1.0 OG F:SER263 3.6 32.8 1.0 OD1 F:ASP365 3.6 97.2 1.0 CB F:THR333 4.0 0.7 1.0 OG1 F:THR333 4.0 1.0 1.0 OD2 F:ASP261 4.0 43.1 1.0 OD2 F:ASP365 4.1 0.3 1.0 CG F:ASP365 4.3 98.2 1.0 OD2 A:ASP78 4.3 83.0 1.0 OD1 A:ASP78 4.4 91.2 1.0 CG2 F:THR333 4.6 0.6 1.0 CB F:SER263 4.7 34.7 1.0 CG A:ASP78 4.7 79.9 1.0 C F:GLY366 4.7 71.5 1.0 CA F:SER265 4.7 33.0 1.0 OD1 F:ASP261 4.8 42.1 1.0 CG F:ASP261 4.9 39.6 1.0 N F:SER265 4.9 33.2 1.0

J.P.Wu, Z.Yan, Z.Q.Li, X.Y.Qian, S.Lu, M.Q.Dong, Q.Zhou, N.Yan. Structure of the Voltage-Gated Calcium Channel CAV1.1 at 3.6 Angstrom Resolution Nature V. 537 191 2016.
ISSN: ESSN 1476-4687
PubMed: 27580036
DOI: 10.1038/NATURE19321