Calcium in PDB 5gqo: Structure of the Second Single Stranded Dna Binding Protein (Ssbb) From Mycobacterium Smegmatis

The structure of Structure of the Second Single Stranded Dna Binding Protein (Ssbb) From Mycobacterium Smegmatis, PDB code: 5gqo was solved by A.Singh, U.Varshney, M.Vijayan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.24 / 2.50
Space group	P 65 2 2
Cell size a, b, c (Å), α, β, γ (°)	73.610, 73.610, 216.210, 90.00, 90.00, 120.00
R / Rfree (%)	21.1 / 25.6

The binding sites of Calcium atom in the Structure of the Second Single Stranded Dna Binding Protein (Ssbb) From Mycobacterium Smegmatis (pdb code 5gqo). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of the Second Single Stranded Dna Binding Protein (Ssbb) From Mycobacterium Smegmatis, PDB code: 5gqo:

Calcium binding site 1 out of 1 in the Structure of the Second Single Stranded Dna Binding Protein (Ssbb) From Mycobacterium Smegmatis


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of the Second Single Stranded Dna Binding Protein (Ssbb) From Mycobacterium Smegmatis within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca201 b:0.4 occ:0.50 O A:PRO18 2.6 70.1 1.0 O A:HOH311 2.9 46.2 1.0 OD1 A:ASN17 3.4 70.3 1.0 C A:PRO18 3.7 49.3 1.0 OH A:TYR29 3.7 56.8 1.0 CG A:ASN17 4.0 64.1 1.0 ND2 A:ASN17 4.0 70.9 1.0 N A:PRO18 4.2 43.7 1.0 CA A:PRO18 4.3 46.7 1.0 CD A:PRO18 4.4 44.4 1.0 CB A:PRO18 4.4 46.9 1.0 CZ A:TYR29 4.6 44.4 1.0 CE1 A:TYR29 4.6 46.2 1.0 N A:VAL19 4.6 48.2 1.0 C A:ASN17 4.7 46.8 1.0 CA A:VAL19 4.9 50.1 1.0 CG A:PRO18 4.9 42.4 1.0 O A:HOH308 5.0 36.6 1.0

A.Singh, U.Varshney, M.Vijayan. Structure of the Second Single Stranded Dna Binding Protein (Ssbb) From Mycobacterium Smegmatis. J. Struct. Biol. V. 196 448 2016.
ISSN: ESSN 1095-8657
PubMed: 27659385
DOI: 10.1016/J.JSB.2016.09.012