Calcium in PDB 5ibq: Crystal Structure of An Abc Solute Binding Protein From Rhizobium Etli Cfn 42 (RHE_PF00037,Target Efi-511357) in Complex with Alpha-D-Apiose

The structure of Crystal Structure of An Abc Solute Binding Protein From Rhizobium Etli Cfn 42 (RHE_PF00037,Target Efi-511357) in Complex with Alpha-D-Apiose, PDB code: 5ibq was solved by M.W.Vetting, M.S.Carter, N.F.Al Obaidi, L.L.Morisco, J.Benach, J.Koss, S.R.Wasserman, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.98 / 1.20
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	93.272, 36.924, 95.619, 90.00, 118.02, 90.00
R / Rfree (%)	15 / 16.4

The binding sites of Calcium atom in the Crystal Structure of An Abc Solute Binding Protein From Rhizobium Etli Cfn 42 (RHE_PF00037,Target Efi-511357) in Complex with Alpha-D-Apiose (pdb code 5ibq). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of An Abc Solute Binding Protein From Rhizobium Etli Cfn 42 (RHE_PF00037,Target Efi-511357) in Complex with Alpha-D-Apiose, PDB code: 5ibq:

Calcium binding site 1 out of 1 in the Crystal Structure of An Abc Solute Binding Protein From Rhizobium Etli Cfn 42 (RHE_PF00037,Target Efi-511357) in Complex with Alpha-D-Apiose


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of An Abc Solute Binding Protein From Rhizobium Etli Cfn 42 (RHE_PF00037,Target Efi-511357) in Complex with Alpha-D-Apiose within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca402 b:10.0 occ:1.00 O A:HOH758 2.3 21.7 1.0 O A:ASP174 2.3 9.4 1.0 OD1 A:ASP177 2.4 9.4 1.0 OD1 A:ASP178 2.4 14.4 1.0 O A:HOH556 2.5 14.2 1.0 OD2 A:ASP178 3.1 25.1 1.0 CG A:ASP178 3.1 12.0 1.0 CG A:ASP177 3.4 8.4 1.0 C A:ASP174 3.4 9.0 1.0 HA A:ASP174 3.4 11.0 1.0 OD2 A:ASP177 3.7 10.9 1.0 CA A:ASP174 3.9 9.1 1.0 HB3 A:ASP174 4.1 14.2 1.0 O A:HOH757 4.2 28.2 1.0 H A:ASP178 4.3 8.9 1.0 N A:ASP178 4.4 7.4 1.0 HA A:VAL175 4.4 11.7 1.0 CB A:ASP178 4.5 9.4 1.0 N A:VAL175 4.5 8.5 1.0 CB A:ASP174 4.5 11.9 1.0 C A:ASP177 4.6 7.7 1.0 H A:ASP177 4.7 9.5 1.0 O A:HIS173 4.7 9.4 0.6 CB A:ASP177 4.7 8.8 1.0 HA A:ASP178 4.7 10.3 1.0 O A:HIS173 4.8 8.7 0.4 CA A:ASP178 4.8 8.6 1.0 O A:VAL175 4.8 8.4 1.0 CA A:VAL175 4.9 9.7 1.0 HB2 A:ASP178 4.9 11.3 1.0 C A:VAL175 5.0 7.6 1.0

M.W.Vetting, M.S.Carter, N.F.Al Obaidi, L.L.Morisco, J.Benach, J.Koss, S.R.Wasserman, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi). Crystal Structure of An Abc Solute Binding Protein From Rhizobium Etli Cfn 42 (RHE_PF00037,Target Efi-511357) in Complex with Alpha-D-Apiose To Be Published.