Calcium in PDB 5j8h: Structure of Calmodulin in A Complex with A Peptide Derived From A Calmodulin-Dependent Kinase
Enzymatic activity of Structure of Calmodulin in A Complex with A Peptide Derived From A Calmodulin-Dependent Kinase
All present enzymatic activity of Structure of Calmodulin in A Complex with A Peptide Derived From A Calmodulin-Dependent Kinase:
2.7.11.20;
Calcium Binding Sites:
The binding sites of Calcium atom in the Structure of Calmodulin in A Complex with A Peptide Derived From A Calmodulin-Dependent Kinase
(pdb code 5j8h). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the
Structure of Calmodulin in A Complex with A Peptide Derived From A Calmodulin-Dependent Kinase, PDB code: 5j8h:
Jump to Calcium binding site number:
1;
2;
Calcium binding site 1 out
of 2 in 5j8h
Go back to
Calcium Binding Sites List in 5j8h
Calcium binding site 1 out
of 2 in the Structure of Calmodulin in A Complex with A Peptide Derived From A Calmodulin-Dependent Kinase
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Structure of Calmodulin in A Complex with A Peptide Derived From A Calmodulin-Dependent Kinase within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca501
b:0.0
occ:1.00
|
OD1
|
A:ASP24
|
2.3
|
0.0
|
1.0
|
OD1
|
A:ASP20
|
2.3
|
0.0
|
1.0
|
OD1
|
A:ASP22
|
2.4
|
0.0
|
1.0
|
O
|
A:THR26
|
2.4
|
0.0
|
1.0
|
OE2
|
A:GLU31
|
2.4
|
0.0
|
1.0
|
OE1
|
A:GLU31
|
2.5
|
0.0
|
1.0
|
HB2
|
A:ASP22
|
2.7
|
0.0
|
1.0
|
CD
|
A:GLU31
|
2.8
|
0.0
|
1.0
|
H
|
A:ASP22
|
3.2
|
0.0
|
1.0
|
CG
|
A:ASP22
|
3.3
|
0.0
|
1.0
|
CG
|
A:ASP24
|
3.3
|
0.0
|
1.0
|
HA
|
A:ILE27
|
3.4
|
0.0
|
1.0
|
CB
|
A:ASP22
|
3.4
|
0.0
|
1.0
|
CG
|
A:ASP20
|
3.5
|
0.0
|
1.0
|
C
|
A:THR26
|
3.6
|
0.0
|
1.0
|
OD2
|
A:ASP24
|
3.7
|
0.0
|
1.0
|
HG1
|
A:THR28
|
3.7
|
0.0
|
1.0
|
H
|
A:THR28
|
3.8
|
0.0
|
1.0
|
H
|
A:THR26
|
3.9
|
0.0
|
1.0
|
HA
|
A:ASP20
|
3.9
|
0.0
|
1.0
|
HG22
|
A:THR28
|
4.0
|
0.0
|
1.0
|
N
|
A:ASP22
|
4.0
|
0.0
|
1.0
|
H
|
A:ASP24
|
4.0
|
0.0
|
1.0
|
HG1
|
A:THR26
|
4.2
|
0.0
|
1.0
|
CG
|
A:GLU31
|
4.2
|
0.0
|
1.0
|
OD2
|
A:ASP20
|
4.2
|
0.0
|
1.0
|
CA
|
A:ASP22
|
4.3
|
0.0
|
1.0
|
HB3
|
A:ASP22
|
4.3
|
0.0
|
1.0
|
CA
|
A:ILE27
|
4.3
|
0.0
|
1.0
|
H
|
A:GLY23
|
4.4
|
0.0
|
1.0
|
H
|
A:LYS21
|
4.4
|
0.0
|
1.0
|
N
|
A:ILE27
|
4.4
|
0.0
|
1.0
|
OD2
|
A:ASP22
|
4.5
|
0.0
|
1.0
|
N
|
A:THR28
|
4.5
|
0.0
|
1.0
|
HG3
|
A:GLU31
|
4.6
|
0.0
|
1.0
|
N
|
A:THR26
|
4.6
|
0.0
|
1.0
|
CB
|
A:ASP20
|
4.6
|
0.0
|
1.0
|
OG1
|
A:THR28
|
4.6
|
0.0
|
1.0
|
HG2
|
A:GLU31
|
4.6
|
0.0
|
1.0
|
CA
|
A:ASP20
|
4.6
|
0.0
|
1.0
|
CB
|
A:ASP24
|
4.6
|
0.0
|
1.0
|
CA
|
A:THR26
|
4.7
|
0.0
|
1.0
|
N
|
A:LYS21
|
4.7
|
0.0
|
1.0
|
H
|
A:GLY25
|
4.7
|
0.0
|
1.0
|
HB3
|
A:ASP24
|
4.7
|
0.0
|
1.0
|
C
|
A:ASP20
|
4.8
|
0.0
|
1.0
|
OG1
|
A:THR26
|
4.8
|
0.0
|
1.0
|
N
|
A:GLY23
|
4.8
|
0.0
|
1.0
|
N
|
A:ASP24
|
4.8
|
0.0
|
1.0
|
C
|
A:ASP22
|
4.8
|
0.0
|
1.0
|
C
|
A:ILE27
|
4.9
|
0.0
|
1.0
|
HB2
|
A:ASP20
|
4.9
|
0.0
|
1.0
|
CG2
|
A:THR28
|
4.9
|
0.0
|
1.0
|
|
Calcium binding site 2 out
of 2 in 5j8h
Go back to
Calcium Binding Sites List in 5j8h
Calcium binding site 2 out
of 2 in the Structure of Calmodulin in A Complex with A Peptide Derived From A Calmodulin-Dependent Kinase
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Structure of Calmodulin in A Complex with A Peptide Derived From A Calmodulin-Dependent Kinase within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca502
b:0.0
occ:1.00
|
OD1
|
A:ASP56
|
2.3
|
0.0
|
1.0
|
OD1
|
A:ASP64
|
2.3
|
0.0
|
1.0
|
OE1
|
A:GLU67
|
2.4
|
0.0
|
1.0
|
OD1
|
A:ASP58
|
2.4
|
0.0
|
1.0
|
O
|
A:THR62
|
2.5
|
0.0
|
1.0
|
OD2
|
A:ASP58
|
2.5
|
0.0
|
1.0
|
OD1
|
A:ASN60
|
2.6
|
0.0
|
1.0
|
OE2
|
A:GLU67
|
2.6
|
0.0
|
1.0
|
CD
|
A:GLU67
|
2.8
|
0.0
|
1.0
|
CG
|
A:ASP58
|
2.8
|
0.0
|
1.0
|
HD22
|
A:ASN60
|
2.9
|
0.0
|
1.0
|
CG
|
A:ASN60
|
3.1
|
0.0
|
1.0
|
H
|
A:ASP64
|
3.3
|
0.0
|
1.0
|
ND2
|
A:ASN60
|
3.3
|
0.0
|
1.0
|
HA
|
A:ASP56
|
3.4
|
0.0
|
1.0
|
H
|
A:THR62
|
3.4
|
0.0
|
1.0
|
CG
|
A:ASP64
|
3.4
|
0.0
|
1.0
|
H
|
A:ASN60
|
3.5
|
0.0
|
1.0
|
CG
|
A:ASP56
|
3.5
|
0.0
|
1.0
|
C
|
A:THR62
|
3.6
|
0.0
|
1.0
|
HB2
|
A:ASP64
|
3.6
|
0.0
|
1.0
|
H
|
A:ASP58
|
3.7
|
0.0
|
1.0
|
N
|
A:ASP64
|
4.0
|
0.0
|
1.0
|
HA
|
A:ILE63
|
4.0
|
0.0
|
1.0
|
CB
|
A:ASP64
|
4.1
|
0.0
|
1.0
|
H
|
A:GLY61
|
4.1
|
0.0
|
1.0
|
HD21
|
A:ASN60
|
4.1
|
0.0
|
1.0
|
N
|
A:THR62
|
4.2
|
0.0
|
1.0
|
CG
|
A:GLU67
|
4.2
|
0.0
|
1.0
|
CB
|
A:ASP56
|
4.2
|
0.0
|
1.0
|
CA
|
A:ASP56
|
4.2
|
0.0
|
1.0
|
CB
|
A:ASP58
|
4.3
|
0.0
|
1.0
|
N
|
A:ASN60
|
4.3
|
0.0
|
1.0
|
H
|
A:ALA57
|
4.3
|
0.0
|
1.0
|
H
|
A:GLY59
|
4.4
|
0.0
|
1.0
|
HB2
|
A:ASP56
|
4.4
|
0.0
|
1.0
|
OD2
|
A:ASP64
|
4.4
|
0.0
|
1.0
|
CB
|
A:ASN60
|
4.4
|
0.0
|
1.0
|
OD2
|
A:ASP56
|
4.4
|
0.0
|
1.0
|
HG3
|
A:GLU67
|
4.4
|
0.0
|
1.0
|
CA
|
A:THR62
|
4.5
|
0.0
|
1.0
|
N
|
A:ILE63
|
4.5
|
0.0
|
1.0
|
N
|
A:ASP58
|
4.5
|
0.0
|
1.0
|
CA
|
A:ILE63
|
4.6
|
0.0
|
1.0
|
HG22
|
A:THR26
|
4.6
|
0.0
|
1.0
|
CA
|
A:ASP64
|
4.6
|
0.0
|
1.0
|
OG1
|
A:THR62
|
4.6
|
0.0
|
1.0
|
C
|
A:ILE63
|
4.6
|
0.0
|
1.0
|
N
|
A:GLY61
|
4.7
|
0.0
|
1.0
|
HB3
|
A:ASP58
|
4.7
|
0.0
|
1.0
|
HB3
|
A:ASN60
|
4.7
|
0.0
|
1.0
|
CA
|
A:ASN60
|
4.7
|
0.0
|
1.0
|
HG2
|
A:GLU67
|
4.8
|
0.0
|
1.0
|
C
|
A:ASP56
|
4.8
|
0.0
|
1.0
|
N
|
A:ALA57
|
4.8
|
0.0
|
1.0
|
N
|
A:GLY59
|
4.8
|
0.0
|
1.0
|
HG1
|
A:THR62
|
4.8
|
0.0
|
1.0
|
CA
|
A:ASP58
|
4.9
|
0.0
|
1.0
|
HB2
|
A:GLU67
|
4.9
|
0.0
|
1.0
|
HB2
|
A:ASP58
|
4.9
|
0.0
|
1.0
|
|
Reference:
K.Lee,
S.Alphonse,
A.Piserchio,
C.D.Tavares,
D.H.Giles,
R.M.Wellmann,
K.N.Dalby,
R.Ghose.
Structural Basis For the Recognition of Eukaryotic Elongation Factor 2 Kinase By Calmodulin. Structure V. 24 1441 2016.
ISSN: ISSN 0969-2126
PubMed: 27499441
DOI: 10.1016/J.STR.2016.06.015
Page generated: Sun Jul 14 20:56:19 2024
|