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Calcium in PDB 5j8h: Structure of Calmodulin in A Complex with A Peptide Derived From A Calmodulin-Dependent Kinase

Enzymatic activity of Structure of Calmodulin in A Complex with A Peptide Derived From A Calmodulin-Dependent Kinase

All present enzymatic activity of Structure of Calmodulin in A Complex with A Peptide Derived From A Calmodulin-Dependent Kinase:
2.7.11.20;

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of Calmodulin in A Complex with A Peptide Derived From A Calmodulin-Dependent Kinase (pdb code 5j8h). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Structure of Calmodulin in A Complex with A Peptide Derived From A Calmodulin-Dependent Kinase, PDB code: 5j8h:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 5j8h

Go back to Calcium Binding Sites List in 5j8h
Calcium binding site 1 out of 2 in the Structure of Calmodulin in A Complex with A Peptide Derived From A Calmodulin-Dependent Kinase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of Calmodulin in A Complex with A Peptide Derived From A Calmodulin-Dependent Kinase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca501

b:0.0
occ:1.00
OD1 A:ASP24 2.3 0.0 1.0
OD1 A:ASP20 2.3 0.0 1.0
OD1 A:ASP22 2.4 0.0 1.0
O A:THR26 2.4 0.0 1.0
OE2 A:GLU31 2.4 0.0 1.0
OE1 A:GLU31 2.5 0.0 1.0
HB2 A:ASP22 2.7 0.0 1.0
CD A:GLU31 2.8 0.0 1.0
H A:ASP22 3.2 0.0 1.0
CG A:ASP22 3.3 0.0 1.0
CG A:ASP24 3.3 0.0 1.0
HA A:ILE27 3.4 0.0 1.0
CB A:ASP22 3.4 0.0 1.0
CG A:ASP20 3.5 0.0 1.0
C A:THR26 3.6 0.0 1.0
OD2 A:ASP24 3.7 0.0 1.0
HG1 A:THR28 3.7 0.0 1.0
H A:THR28 3.8 0.0 1.0
H A:THR26 3.9 0.0 1.0
HA A:ASP20 3.9 0.0 1.0
HG22 A:THR28 4.0 0.0 1.0
N A:ASP22 4.0 0.0 1.0
H A:ASP24 4.0 0.0 1.0
HG1 A:THR26 4.2 0.0 1.0
CG A:GLU31 4.2 0.0 1.0
OD2 A:ASP20 4.2 0.0 1.0
CA A:ASP22 4.3 0.0 1.0
HB3 A:ASP22 4.3 0.0 1.0
CA A:ILE27 4.3 0.0 1.0
H A:GLY23 4.4 0.0 1.0
H A:LYS21 4.4 0.0 1.0
N A:ILE27 4.4 0.0 1.0
OD2 A:ASP22 4.5 0.0 1.0
N A:THR28 4.5 0.0 1.0
HG3 A:GLU31 4.6 0.0 1.0
N A:THR26 4.6 0.0 1.0
CB A:ASP20 4.6 0.0 1.0
OG1 A:THR28 4.6 0.0 1.0
HG2 A:GLU31 4.6 0.0 1.0
CA A:ASP20 4.6 0.0 1.0
CB A:ASP24 4.6 0.0 1.0
CA A:THR26 4.7 0.0 1.0
N A:LYS21 4.7 0.0 1.0
H A:GLY25 4.7 0.0 1.0
HB3 A:ASP24 4.7 0.0 1.0
C A:ASP20 4.8 0.0 1.0
OG1 A:THR26 4.8 0.0 1.0
N A:GLY23 4.8 0.0 1.0
N A:ASP24 4.8 0.0 1.0
C A:ASP22 4.8 0.0 1.0
C A:ILE27 4.9 0.0 1.0
HB2 A:ASP20 4.9 0.0 1.0
CG2 A:THR28 4.9 0.0 1.0

Calcium binding site 2 out of 2 in 5j8h

Go back to Calcium Binding Sites List in 5j8h
Calcium binding site 2 out of 2 in the Structure of Calmodulin in A Complex with A Peptide Derived From A Calmodulin-Dependent Kinase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Structure of Calmodulin in A Complex with A Peptide Derived From A Calmodulin-Dependent Kinase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca502

b:0.0
occ:1.00
OD1 A:ASP56 2.3 0.0 1.0
OD1 A:ASP64 2.3 0.0 1.0
OE1 A:GLU67 2.4 0.0 1.0
OD1 A:ASP58 2.4 0.0 1.0
O A:THR62 2.5 0.0 1.0
OD2 A:ASP58 2.5 0.0 1.0
OD1 A:ASN60 2.6 0.0 1.0
OE2 A:GLU67 2.6 0.0 1.0
CD A:GLU67 2.8 0.0 1.0
CG A:ASP58 2.8 0.0 1.0
HD22 A:ASN60 2.9 0.0 1.0
CG A:ASN60 3.1 0.0 1.0
H A:ASP64 3.3 0.0 1.0
ND2 A:ASN60 3.3 0.0 1.0
HA A:ASP56 3.4 0.0 1.0
H A:THR62 3.4 0.0 1.0
CG A:ASP64 3.4 0.0 1.0
H A:ASN60 3.5 0.0 1.0
CG A:ASP56 3.5 0.0 1.0
C A:THR62 3.6 0.0 1.0
HB2 A:ASP64 3.6 0.0 1.0
H A:ASP58 3.7 0.0 1.0
N A:ASP64 4.0 0.0 1.0
HA A:ILE63 4.0 0.0 1.0
CB A:ASP64 4.1 0.0 1.0
H A:GLY61 4.1 0.0 1.0
HD21 A:ASN60 4.1 0.0 1.0
N A:THR62 4.2 0.0 1.0
CG A:GLU67 4.2 0.0 1.0
CB A:ASP56 4.2 0.0 1.0
CA A:ASP56 4.2 0.0 1.0
CB A:ASP58 4.3 0.0 1.0
N A:ASN60 4.3 0.0 1.0
H A:ALA57 4.3 0.0 1.0
H A:GLY59 4.4 0.0 1.0
HB2 A:ASP56 4.4 0.0 1.0
OD2 A:ASP64 4.4 0.0 1.0
CB A:ASN60 4.4 0.0 1.0
OD2 A:ASP56 4.4 0.0 1.0
HG3 A:GLU67 4.4 0.0 1.0
CA A:THR62 4.5 0.0 1.0
N A:ILE63 4.5 0.0 1.0
N A:ASP58 4.5 0.0 1.0
CA A:ILE63 4.6 0.0 1.0
HG22 A:THR26 4.6 0.0 1.0
CA A:ASP64 4.6 0.0 1.0
OG1 A:THR62 4.6 0.0 1.0
C A:ILE63 4.6 0.0 1.0
N A:GLY61 4.7 0.0 1.0
HB3 A:ASP58 4.7 0.0 1.0
HB3 A:ASN60 4.7 0.0 1.0
CA A:ASN60 4.7 0.0 1.0
HG2 A:GLU67 4.8 0.0 1.0
C A:ASP56 4.8 0.0 1.0
N A:ALA57 4.8 0.0 1.0
N A:GLY59 4.8 0.0 1.0
HG1 A:THR62 4.8 0.0 1.0
CA A:ASP58 4.9 0.0 1.0
HB2 A:GLU67 4.9 0.0 1.0
HB2 A:ASP58 4.9 0.0 1.0

Reference:

K.Lee, S.Alphonse, A.Piserchio, C.D.Tavares, D.H.Giles, R.M.Wellmann, K.N.Dalby, R.Ghose. Structural Basis For the Recognition of Eukaryotic Elongation Factor 2 Kinase By Calmodulin. Structure V. 24 1441 2016.
ISSN: ISSN 0969-2126
PubMed: 27499441
DOI: 10.1016/J.STR.2016.06.015
Page generated: Sun Jul 14 20:56:19 2024

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