Calcium in PDB 5j8t: uc(Nmr) Structure of Excalibur Domain of Cbpl

Enzymatic activity of uc(Nmr) Structure of Excalibur Domain of Cbpl

All present enzymatic activity of uc(Nmr) Structure of Excalibur Domain of Cbpl:
3.2.1.96;

Calcium Binding Sites:

The binding sites of Calcium atom in the uc(Nmr) Structure of Excalibur Domain of Cbpl (pdb code 5j8t). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the uc(Nmr) Structure of Excalibur Domain of Cbpl, PDB code: 5j8t:

Calcium binding site 1 out of 1 in 5j8t

Go back to Calcium Binding Sites List in 5j8t
Calcium binding site 1 out of 1 in the uc(Nmr) Structure of Excalibur Domain of Cbpl


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of uc(Nmr) Structure of Excalibur Domain of Cbpl within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca101

b:0.0
occ:1.00
OD2 A:ASP62 2.3 0.0 1.0
OD2 A:ASP60 2.3 0.0 1.0
OD2 A:ASP58 2.3 0.0 1.0
OE1 A:GLU67 2.3 0.0 1.0
OD1 A:ASP58 2.9 0.0 1.0
CG A:ASP62 3.0 0.0 1.0
CG A:ASP58 3.0 0.0 1.0
OE2 A:GLU67 3.0 0.0 1.0
OD1 A:ASP60 3.1 0.0 1.0
OD1 A:ASP62 3.1 0.0 1.0
CG A:ASP60 3.1 0.0 1.0
CD A:GLU67 3.1 0.0 1.0
O A:VAL64 3.7 0.0 1.0
H A:ASP62 3.7 0.0 1.0
HB A:VAL64 3.9 0.0 1.0
CB A:ASP62 4.2 0.0 1.0
HB3 A:ASP62 4.3 0.0 1.0
HA A:ALA65 4.5 0.0 1.0
CB A:ASP58 4.5 0.0 1.0
H A:VAL64 4.5 0.0 1.0
CB A:ASP60 4.6 0.0 1.0
C A:VAL64 4.6 0.0 1.0
N A:ASP62 4.6 0.0 1.0
CG A:GLU67 4.6 0.0 1.0
H A:ASP60 4.7 0.0 1.0
HB2 A:ASP58 4.7 0.0 1.0
HB2 A:ASP60 4.8 0.0 1.0
HG2 A:GLU67 4.8 0.0 1.0
CA A:ASP62 4.9 0.0 1.0
HB3 A:GLU67 4.9 0.0 1.0
H A:GLU67 5.0 0.0 1.0
CB A:VAL64 5.0 0.0 1.0

Reference:

J.Gutierrez-Fernandez, M.Alcorlo, S.Galan-Bartual, D.Pantoja-Uceda, M.A.Trevino, M.Bruix, S.Hammerschmidt, J.A.Hermoso. Molecular Choline-Bindind Protein L Involved in Pneumococcal Adhesion and Virulence Through Exposed Excalibur Domanin To Be Published.
Page generated: Sat Dec 12 05:31:31 2020

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