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Calcium in PDB 5jr4: Crystal Structure of Fimh A27V/V163A From E. Coli UTI89 Bound to Fimg N-Terminal Extension

Protein crystallography data

The structure of Crystal Structure of Fimh A27V/V163A From E. Coli UTI89 Bound to Fimg N-Terminal Extension, PDB code: 5jr4 was solved by V.Kalas, S.J.Hultgren, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 62.35 / 2.60
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 122.320, 33.030, 72.450, 90.00, 120.62, 90.00
R / Rfree (%) 21.5 / 26.3

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Fimh A27V/V163A From E. Coli UTI89 Bound to Fimg N-Terminal Extension (pdb code 5jr4). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Fimh A27V/V163A From E. Coli UTI89 Bound to Fimg N-Terminal Extension, PDB code: 5jr4:

Calcium binding site 1 out of 1 in 5jr4

Go back to Calcium Binding Sites List in 5jr4
Calcium binding site 1 out of 1 in the Crystal Structure of Fimh A27V/V163A From E. Coli UTI89 Bound to Fimg N-Terminal Extension


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Fimh A27V/V163A From E. Coli UTI89 Bound to Fimg N-Terminal Extension within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca101

b:33.2
occ:1.00
OD1 B:ASP2 2.5 26.4 1.0
O A:HOH413 2.5 25.6 1.0
CG B:ASP2 3.3 25.4 1.0
O A:HOH421 3.7 23.6 1.0
OH A:TYR278 3.8 31.0 1.0
CB B:ASP2 3.9 23.4 1.0
OD2 B:ASP2 4.0 22.0 1.0
O A:CYS161 4.4 32.1 1.0
CD2 A:PHE276 4.7 25.5 1.0
CZ A:TYR278 4.8 31.2 1.0
CA B:ASP2 4.9 29.1 1.0
CE2 A:TYR278 4.9 30.4 1.0

Reference:

V.Kalas, J.S.Pinkner, T.J.Hannan, M.E.Hibbing, K.W.Dodson, A.S.Holehouse, H.Zhang, N.H.Tolia, M.L.Gross, R.V.Pappu, J.Janetka, S.J.Hultgren. Evolutionary Fine-Tuning of Conformational Ensembles in Fimh During Host-Pathogen Interactions. Sci Adv V. 3 01944 2017.
ISSN: ESSN 2375-2548
PubMed: 28246638
DOI: 10.1126/SCIADV.1601944
Page generated: Mon Jul 15 06:31:10 2024

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