Calcium in PDB 5ksa: BEL602-DQ8.5-Glia-GAMMA1 Complex

The structure of BEL602-DQ8.5-Glia-GAMMA1 Complex, PDB code: 5ksa was solved by J.Petersen, J.Rossjohn, H.H.Reid, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.75 / 2.00
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	62.548, 98.831, 80.175, 90.00, 95.69, 90.00
R / Rfree (%)	16.9 / 20.6

The binding sites of Calcium atom in the BEL602-DQ8.5-Glia-GAMMA1 Complex (pdb code 5ksa). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the BEL602-DQ8.5-Glia-GAMMA1 Complex, PDB code: 5ksa:

Calcium binding site 1 out of 1 in the BEL602-DQ8.5-Glia-GAMMA1 Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of BEL602-DQ8.5-Glia-GAMMA1 Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca202 b:59.6 occ:1.00 O A:HOH387 2.4 39.2 1.0 O A:HOH336 2.4 42.5 1.0 O A:HOH424 2.6 56.7 1.0 O A:HOH445 2.7 45.2 1.0 OG A:SER44 2.9 48.6 1.0 CB A:SER44 4.2 36.9 1.0 O B:HOH394 4.2 49.0 1.0 O A:HOH337 4.2 43.4 1.0 O A:HOH301 4.2 43.2 1.0 O A:GLU134 4.2 29.8 1.0 OE1 A:GLU30 4.5 28.6 1.0 O A:HOH315 4.6 40.9 1.0 CA A:SER44 4.6 33.1 1.0 CA A:THR135 4.7 26.8 1.0 OE2 A:GLU30 4.8 39.3 1.0 CD A:GLU30 4.8 37.8 1.0 O A:HOH334 4.8 55.4 1.0

J.Petersen, Y.Kooy-Winkelaar, K.L.Loh, M.Tran, J.Van Bergen, F.Koning, J.Rossjohn, H.H.Reid. Diverse T Cell Receptor Gene Usage in Hla-DQ8-Associated Celiac Disease Converges Into A Consensus Binding Solution. Structure V. 24 1643 2016.
ISSN: ISSN 0969-2126
PubMed: 27568928
DOI: 10.1016/J.STR.2016.07.010