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Calcium in PDB 5lw3: Azotobacter Vinelandii Mannuronan C-5 Epimerase ALGE6 A-Module

Protein crystallography data

The structure of Azotobacter Vinelandii Mannuronan C-5 Epimerase ALGE6 A-Module, PDB code: 5lw3 was solved by U.Rothweiler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.62 / 1.19
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 100.884, 63.672, 73.075, 90.00, 97.16, 90.00
R / Rfree (%) 14.4 / 16

Other elements in 5lw3:

The structure of Azotobacter Vinelandii Mannuronan C-5 Epimerase ALGE6 A-Module also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Azotobacter Vinelandii Mannuronan C-5 Epimerase ALGE6 A-Module (pdb code 5lw3). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Azotobacter Vinelandii Mannuronan C-5 Epimerase ALGE6 A-Module, PDB code: 5lw3:

Calcium binding site 1 out of 1 in 5lw3

Go back to Calcium Binding Sites List in 5lw3
Calcium binding site 1 out of 1 in the Azotobacter Vinelandii Mannuronan C-5 Epimerase ALGE6 A-Module


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Azotobacter Vinelandii Mannuronan C-5 Epimerase ALGE6 A-Module within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca403

b:14.6
occ:0.54
O A:GLU95 2.3 16.9 1.0
OD1 A:ASP133 2.4 15.1 1.0
O A:GLY124 2.4 14.9 1.0
O A:PRO92 2.5 16.4 1.0
OG1 A:THR97 2.7 16.5 1.0
OG A:SER91 2.8 13.9 1.0
CG A:ASP133 3.2 14.1 1.0
OD2 A:ASP133 3.3 14.5 1.0
C A:GLU95 3.5 18.1 1.0
C A:GLY124 3.6 15.7 1.0
CB A:THR97 3.7 16.7 1.0
C A:PRO92 3.7 15.5 1.0
CB A:SER91 3.7 14.7 1.0
N A:THR97 3.8 16.3 1.0
O A:HOH699 4.0 17.0 1.0
N A:PRO92 4.0 14.9 1.0
N A:GLU95 4.2 18.4 1.0
C A:SER91 4.2 13.9 1.0
CA A:GLU95 4.3 20.3 1.0
CD A:PRO92 4.3 16.9 1.0
CA A:PRO92 4.3 16.2 1.0
N A:GLY124 4.4 13.2 1.0
N A:TYR125 4.4 15.3 1.0
CA A:TYR125 4.4 17.4 1.0
CA A:THR97 4.4 15.3 1.0
CB A:GLU95 4.4 21.8 1.0
N A:GLU96 4.4 17.8 1.0
CA A:GLY124 4.5 13.4 1.0
CA A:GLU96 4.6 18.9 1.0
CA A:SER91 4.6 14.2 1.0
C A:GLU96 4.6 18.5 1.0
O A:SER91 4.6 15.3 1.0
CB A:ASP133 4.7 14.2 1.0
N A:PHE93 4.7 17.0 1.0
CB A:PRO92 4.7 17.7 1.0
O A:HOH623 4.9 17.9 1.0
CG2 A:THR97 4.9 14.7 1.0

Reference:

U.Rothweiler, U.Rothweiler. N/A N/A.
Page generated: Wed Jul 9 08:01:04 2025

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