Calcium in PDB 5m0y: Crystal Structure of the Cohscaa-Xdoccipb Type II Complex From Clostridium Thermocellum at 1.5ANGSTROM Resolution

The structure of Crystal Structure of the Cohscaa-Xdoccipb Type II Complex From Clostridium Thermocellum at 1.5ANGSTROM Resolution, PDB code: 5m0y was solved by B.A.Pinheiro, J.L.Bras, A.L.Carvalho, C.M.G.A.Fontes, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.30 / 1.50
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	43.408, 63.741, 141.196, 90.00, 90.00, 90.00
R / Rfree (%)	19.1 / 20.3

The binding sites of Calcium atom in the Crystal Structure of the Cohscaa-Xdoccipb Type II Complex From Clostridium Thermocellum at 1.5ANGSTROM Resolution (pdb code 5m0y). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of the Cohscaa-Xdoccipb Type II Complex From Clostridium Thermocellum at 1.5ANGSTROM Resolution, PDB code: 5m0y:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Crystal Structure of the Cohscaa-Xdoccipb Type II Complex From Clostridium Thermocellum at 1.5ANGSTROM Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Cohscaa-Xdoccipb Type II Complex From Clostridium Thermocellum at 1.5ANGSTROM Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca201 b:19.6 occ:1.00 O B:ALA144 2.3 21.0 1.0 OD1 B:ASN140 2.3 21.2 1.0 OD1 B:ASP138 2.3 21.8 1.0 O B:HOH313 2.4 23.1 1.0 OD2 B:ASP149 2.4 18.9 1.0 OD1 B:ASP142 2.4 22.5 1.0 OD1 B:ASP149 2.5 19.9 1.0 CG B:ASP149 2.8 19.3 1.0 CG B:ASP142 3.3 22.8 1.0 CG B:ASN140 3.3 21.8 1.0 CG B:ASP138 3.4 21.0 1.0 C B:ALA144 3.5 20.6 1.0 OD2 B:ASP142 3.7 23.1 1.0 ND2 B:ASN140 3.8 23.0 1.0 OD2 B:ASP138 4.1 22.0 1.0 N B:ASP142 4.2 23.9 1.0 N B:ALA144 4.3 21.3 1.0 CB B:ASP149 4.3 18.6 1.0 CA B:ASP138 4.3 20.0 1.0 N B:ASN140 4.4 21.2 1.0 CA B:ILE145 4.4 19.6 1.0 N B:ILE145 4.4 19.9 1.0 CB B:ASP138 4.4 20.6 1.0 CA B:ALA144 4.4 20.9 1.0 CB B:ASP142 4.5 23.5 1.0 C B:ASP138 4.5 20.3 1.0 N B:MET141 4.5 23.4 1.0 OD1 B:ASN146 4.5 20.8 1.0 N B:LEU139 4.6 19.9 1.0 CB B:ASN140 4.6 21.9 1.0 N B:ASN146 4.8 19.6 1.0 CA B:ASN140 4.8 21.9 1.0 CA B:ASP142 4.8 23.5 1.0 C B:ASN140 4.8 22.8 1.0 N B:ASP149 4.9 18.5 1.0 CB B:ALA144 4.9 21.4 1.0 N B:GLY143 5.0 23.2 1.0

Calcium binding site 2 out of 2 in the Crystal Structure of the Cohscaa-Xdoccipb Type II Complex From Clostridium Thermocellum at 1.5ANGSTROM Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of the Cohscaa-Xdoccipb Type II Complex From Clostridium Thermocellum at 1.5ANGSTROM Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca202 b:14.8 occ:1.00 O B:HOH318 2.3 14.6 1.0 O B:ALA111 2.3 16.8 1.0 OD1 B:ASP101 2.3 17.2 1.0 OD1 B:ASP109 2.4 17.4 1.0 OD1 B:ASP116 2.5 14.5 1.0 O B:HOH336 2.5 18.0 1.0 OD2 B:ASP116 2.6 14.6 1.0 CG B:ASP116 2.9 13.9 1.0 CG B:ASP109 3.4 18.2 1.0 CG B:ASP101 3.5 17.4 1.0 C B:ALA111 3.5 16.0 1.0 OD2 B:ASP109 3.8 18.7 1.0 CA B:ASP101 3.9 17.5 1.0 N B:VAL102 4.2 18.4 1.0 N B:ALA111 4.2 16.7 1.0 CB B:ASP101 4.2 17.2 1.0 C B:ASP101 4.3 18.1 1.0 CB B:ASP116 4.4 13.7 1.0 N B:ASP109 4.4 20.2 1.0 CA B:ALA111 4.4 16.2 1.0 OD2 B:ASP101 4.4 17.6 1.0 O B:HOH358 4.4 21.8 1.0 N B:ILE112 4.5 15.5 1.0 CA B:ILE112 4.5 15.2 1.0 OD1 B:ASN113 4.5 14.1 1.0 O B:VAL102 4.5 22.5 1.0 CB B:ASP109 4.7 18.6 1.0 O B:GLY100 4.7 18.0 1.0 N B:ASN113 4.8 14.2 1.0 CB B:ALA111 4.8 16.1 1.0 N B:ASN110 4.8 18.4 1.0 CA B:ASP109 4.8 19.3 1.0 O B:HOH369 4.9 33.0 1.0 N B:ASP116 4.9 13.3 1.0 C B:ASP109 5.0 18.7 1.0

J.L.Bras, B.A.Pinheiro, K.Cameron, F.Cuskin, A.Viegas, S.Najmudin, P.Bule, V.M.Pires, M.J.Romao, E.A.Bayer, H.L.Spencer, S.Smith, H.J.Gilbert, V.D.Alves, A.L.Carvalho, C.M.Fontes. Diverse Specificity of Cellulosome Attachment to the Bacterial Cell Surface. Sci Rep V. 6 38292 2016.
ISSN: ESSN 2045-2322
PubMed: 27924829
DOI: 10.1038/SREP38292