Calcium in PDB 5tgf: Crystal Structure of Putative Beta-Lactamase From Bacteroides Dorei Dsm 17855

The structure of Crystal Structure of Putative Beta-Lactamase From Bacteroides Dorei Dsm 17855, PDB code: 5tgf was solved by B.Nocek, C.Hatzos-Skintges, G.Babnigg, A.Joachimiak, Midwest Center Forstructural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.00 / 1.81
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	63.475, 68.292, 88.216, 103.84, 106.28, 101.20
R / Rfree (%)	15.2 / 19.3

The binding sites of Calcium atom in the Crystal Structure of Putative Beta-Lactamase From Bacteroides Dorei Dsm 17855 (pdb code 5tgf). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of Putative Beta-Lactamase From Bacteroides Dorei Dsm 17855, PDB code: 5tgf:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Crystal Structure of Putative Beta-Lactamase From Bacteroides Dorei Dsm 17855


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Putative Beta-Lactamase From Bacteroides Dorei Dsm 17855 within 5.0Å range: probe atom residue distance (Å) B Occ C:Ca403 b:24.6 occ:0.63 OD2 C:ASP93 2.3 31.4 1.0 O C:HOH706 3.0 41.6 1.0 CG C:ASP93 3.4 27.5 1.0 CB C:ASP93 4.1 23.9 1.0 O C:LEU133 4.4 21.3 1.0 OD1 C:ASP93 4.4 26.1 1.0 CA C:ASP93 4.5 22.4 1.0 O C:HOH621 5.0 34.3 1.0 O C:GLY92 5.0 21.0 1.0

Calcium binding site 2 out of 2 in the Crystal Structure of Putative Beta-Lactamase From Bacteroides Dorei Dsm 17855


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of Putative Beta-Lactamase From Bacteroides Dorei Dsm 17855 within 5.0Å range: probe atom residue distance (Å) B Occ D:Ca402 b:29.1 occ:0.62 O D:HOH708 2.2 44.9 1.0 O D:HOH510 2.3 34.5 1.0 O D:LEU77 2.4 14.3 1.0 O D:HOH702 2.4 40.6 1.0 O D:THR75 2.6 17.4 1.0 O D:VAL72 2.7 18.1 1.0 C D:LEU77 3.4 15.9 1.0 C D:ASP76 3.6 17.0 1.0 C D:VAL72 3.7 18.1 1.0 C D:THR75 3.7 17.3 1.0 N D:LEU77 3.8 16.2 1.0 CG1 D:VAL72 3.8 15.5 1.0 O D:ASP76 3.9 19.1 1.0 CA D:ASP76 4.0 19.1 1.0 CA D:VAL72 4.1 14.9 1.0 CA D:LEU77 4.3 16.5 1.0 N D:SER78 4.3 16.7 1.0 N D:ASP76 4.3 18.8 1.0 CA D:SER78 4.4 20.4 1.0 O D:HOH639 4.5 39.4 1.0 CB D:SER78 4.5 27.1 1.0 CB D:VAL72 4.5 13.9 1.0 OG D:SER78 4.7 39.8 1.0 N D:THR75 4.7 18.7 1.0 N D:ASP73 4.9 17.4 1.0 CA D:THR75 4.9 17.5 1.0 OG1 D:THR75 5.0 16.5 1.0

B.Nocek, C.Hatzos-Skintges, A.Joachimaik, G.Babnigg, Midwest Center For Structural Genomics (Mcsg). Crystal Structure of A Beta-Lactamase From Bacteroides Dorei Dsm 17855 To Be Published.