Atomistry » Calcium » PDB 5tad-5ttc » 5ts2
Atomistry »
  Calcium »
    PDB 5tad-5ttc »
      5ts2 »

Calcium in PDB 5ts2: Crystal Structure of A Phosphopantetheine Adenylyltransferase (Coad, Ppat) From Pseudomonas Aeruginosa Bound to Dephospho Coenzyme A

Enzymatic activity of Crystal Structure of A Phosphopantetheine Adenylyltransferase (Coad, Ppat) From Pseudomonas Aeruginosa Bound to Dephospho Coenzyme A

All present enzymatic activity of Crystal Structure of A Phosphopantetheine Adenylyltransferase (Coad, Ppat) From Pseudomonas Aeruginosa Bound to Dephospho Coenzyme A:
2.7.7.3;

Protein crystallography data

The structure of Crystal Structure of A Phosphopantetheine Adenylyltransferase (Coad, Ppat) From Pseudomonas Aeruginosa Bound to Dephospho Coenzyme A, PDB code: 5ts2 was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.87 / 2.30
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 98.380, 101.350, 105.710, 90.00, 90.00, 90.00
R / Rfree (%) 18 / 24.4

Other elements in 5ts2:

The structure of Crystal Structure of A Phosphopantetheine Adenylyltransferase (Coad, Ppat) From Pseudomonas Aeruginosa Bound to Dephospho Coenzyme A also contains other interesting chemical elements:

Chlorine (Cl) 11 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of A Phosphopantetheine Adenylyltransferase (Coad, Ppat) From Pseudomonas Aeruginosa Bound to Dephospho Coenzyme A (pdb code 5ts2). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of A Phosphopantetheine Adenylyltransferase (Coad, Ppat) From Pseudomonas Aeruginosa Bound to Dephospho Coenzyme A, PDB code: 5ts2:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 5ts2

Go back to Calcium Binding Sites List in 5ts2
Calcium binding site 1 out of 2 in the Crystal Structure of A Phosphopantetheine Adenylyltransferase (Coad, Ppat) From Pseudomonas Aeruginosa Bound to Dephospho Coenzyme A


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of A Phosphopantetheine Adenylyltransferase (Coad, Ppat) From Pseudomonas Aeruginosa Bound to Dephospho Coenzyme A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca202

b:24.5
occ:1.00
 NE2 A:HIS-3 2.2 45.1 1.0
NE2 A:HIS-5 2.4 42.6 1.0
CE1 A:HIS-3 3.0 45.1 1.0
CD2 A:HIS-5 3.2 41.6 1.0
CD2 A:HIS-3 3.2 44.1 1.0
CE1 A:HIS-5 3.4 42.6 1.0
ND1 A:HIS-3 4.2 50.0 1.0
CG A:HIS-3 4.3 44.9 1.0
CG A:HIS-5 4.4 41.0 1.0
ND1 A:HIS-5 4.5 41.8 1.0

Calcium binding site 2 out of 2 in 5ts2

Go back to Calcium Binding Sites List in 5ts2
Calcium binding site 2 out of 2 in the Crystal Structure of A Phosphopantetheine Adenylyltransferase (Coad, Ppat) From Pseudomonas Aeruginosa Bound to Dephospho Coenzyme A


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of A Phosphopantetheine Adenylyltransferase (Coad, Ppat) From Pseudomonas Aeruginosa Bound to Dephospho Coenzyme A within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Ca202

b:0.3
occ:1.00
 O E:HOH330 2.4 54.2 1.0
O E:HOH311 2.5 45.2 1.0
O E:VAL64 2.6 56.1 1.0
O E:HOH319 3.1 56.6 1.0
C E:VAL64 3.8 49.2 1.0
O E:HOH309 4.0 45.7 1.0
NE2 E:GLN55 4.3 77.5 1.0
OE1 E:GLN55 4.4 79.2 1.0
O E:LEU61 4.4 64.4 1.0
CA E:GLU65 4.5 52.5 1.0
N E:GLU65 4.6 49.2 1.0
CD E:GLN55 4.8 77.4 1.0
CA E:VAL64 4.8 50.9 1.0
N E:VAL64 4.9 49.2 1.0

Reference:

T.E.Edwards, D.R.Davies, J.W.Fairman, D.Lorimer, Seattle Structural Genomics Center For Infectious Disease(Ssgcid). Crystal Structure of A Phosphopantetheine Adenylyltransferase (Coad, Ppat) From Pseudomonas Aeruginosa Bound to Dephospho Coenzyme A To Be Published.
Page generated: Mon Jul 15 11:23:16 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy