Calcium in PDB 5vao: Crystal Structure of EVP30 C-Terminus and Enp Peptide

The structure of Crystal Structure of EVP30 C-Terminus and Enp Peptide, PDB code: 5vao was solved by W.Xu, D.W.Leung, G.K.Amarasinghe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	105.55 / 2.56
Space group	I 41 2 2
Cell size a, b, c (Å), α, β, γ (°)	139.478, 139.478, 161.467, 90.00, 90.00, 90.00
R / Rfree (%)	18.3 / 22.5

The structure of Crystal Structure of EVP30 C-Terminus and Enp Peptide also contains other interesting chemical elements:

Chlorine

(Cl)

8 atoms

The binding sites of Calcium atom in the Crystal Structure of EVP30 C-Terminus and Enp Peptide (pdb code 5vao). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of EVP30 C-Terminus and Enp Peptide, PDB code: 5vao:

Calcium binding site 1 out of 1 in the Crystal Structure of EVP30 C-Terminus and Enp Peptide


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of EVP30 C-Terminus and Enp Peptide within 5.0Å range: probe atom residue distance (Å) B Occ D:Ca302 b:39.8 occ:1.00 O D:HOH421 2.3 28.0 1.0 OE1 D:GLN212 2.3 25.5 1.0 O D:HOH404 2.4 24.8 1.0 OE1 D:GLU209 2.5 24.9 1.0 CD D:GLN212 3.4 26.7 1.0 CD D:GLU209 3.5 24.7 1.0 OE2 D:GLU209 3.7 23.1 1.0 NE2 D:GLN212 4.0 27.3 1.0 O D:HOH407 4.5 44.2 1.0 O1 D:GOL301 4.5 92.8 1.0 O D:HOH403 4.6 32.1 1.0 CG D:GLN212 4.7 25.0 1.0 CB D:GLN212 4.8 24.1 1.0 CG D:GLU209 4.9 24.7 1.0

W.Xu, P.Luthra, C.Wu, J.Batra, D.W.Leung, C.F.Basler, G.K.Amarasinghe. Ebola Virus VP30 and Nucleoprotein Interactions Modulate Viral Rna Synthesis. Nat Commun V. 8 15576 2017.
ISSN: ESSN 2041-1723
PubMed: 28593988
DOI: 10.1038/NCOMMS15576