Calcium in PDB 5w0u: Crystal Structure of Mbp Fused Activation-Induced Cytidine Deaminase (Aid) in Complex with Dcmp
Enzymatic activity of Crystal Structure of Mbp Fused Activation-Induced Cytidine Deaminase (Aid) in Complex with Dcmp
All present enzymatic activity of Crystal Structure of Mbp Fused Activation-Induced Cytidine Deaminase (Aid) in Complex with Dcmp:
3.5.4.38;
Protein crystallography data
The structure of Crystal Structure of Mbp Fused Activation-Induced Cytidine Deaminase (Aid) in Complex with Dcmp, PDB code: 5w0u
was solved by
Q.Qiao,
L.Wang,
H.Wu,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
153.94 /
2.90
|
|
Space group
|
P 1 2 1
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
125.005,
39.777,
153.935,
90.00,
90.14,
90.00
|
|
R / Rfree (%)
|
25.1 /
28.1
|
Other elements in 5w0u:
The structure of Crystal Structure of Mbp Fused Activation-Induced Cytidine Deaminase (Aid) in Complex with Dcmp also contains other interesting chemical elements:
Calcium Binding Sites:
The binding sites of Calcium atom in the Crystal Structure of Mbp Fused Activation-Induced Cytidine Deaminase (Aid) in Complex with Dcmp
(pdb code 5w0u). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the
Crystal Structure of Mbp Fused Activation-Induced Cytidine Deaminase (Aid) in Complex with Dcmp, PDB code: 5w0u:
Jump to Calcium binding site number:
1;
2;
Calcium binding site 1 out
of 2 in 5w0u
Go back to
Calcium Binding Sites List in 5w0u
Calcium binding site 1 out
of 2 in the Crystal Structure of Mbp Fused Activation-Induced Cytidine Deaminase (Aid) in Complex with Dcmp
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Crystal Structure of Mbp Fused Activation-Induced Cytidine Deaminase (Aid) in Complex with Dcmp within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca2003
b:0.3
occ:1.00
|
N
|
B:ASN101
|
0.6
|
0.2
|
1.0
|
|
CA
|
B:LYS103
|
0.6
|
99.6
|
1.0
|
|
CD1
|
B:ILE179
|
0.9
|
0.1
|
1.0
|
|
CG1
|
B:ILE179
|
1.0
|
0.0
|
1.0
|
|
C
|
B:LYS103
|
1.0
|
92.9
|
1.0
|
|
CB
|
B:THR81
|
1.0
|
94.3
|
1.0
|
|
C
|
B:TYR100
|
1.0
|
0.5
|
1.0
|
|
O
|
B:ALA370
|
1.1
|
0.9
|
1.0
|
|
CG2
|
B:ILE179
|
1.1
|
0.2
|
1.0
|
|
N
|
B:LYS103
|
1.1
|
91.9
|
1.0
|
|
CA
|
B:THR81
|
1.3
|
89.5
|
1.0
|
|
O
|
B:TYR100
|
1.5
|
1.0
|
1.0
|
|
N
|
B:LEU104
|
1.5
|
89.1
|
1.0
|
|
CG2
|
B:THR81
|
1.7
|
82.6
|
1.0
|
|
O
|
B:LYS103
|
1.7
|
90.4
|
1.0
|
|
O
|
B:THR81
|
1.8
|
88.5
|
1.0
|
|
CB
|
B:ILE179
|
1.9
|
0.3
|
1.0
|
|
CA
|
B:ASN101
|
1.9
|
0.7
|
1.0
|
|
N
|
B:GLY102
|
2.0
|
0.8
|
1.0
|
|
C
|
B:THR81
|
2.1
|
84.6
|
1.0
|
|
OG1
|
B:THR81
|
2.1
|
0.6
|
1.0
|
|
CB
|
B:LYS103
|
2.1
|
0.2
|
1.0
|
|
CA
|
B:TYR100
|
2.1
|
95.4
|
1.0
|
|
C
|
B:ALA370
|
2.1
|
0.6
|
1.0
|
|
O
|
B:ILE80
|
2.3
|
87.8
|
1.0
|
|
C
|
B:GLY102
|
2.4
|
95.9
|
1.0
|
|
N
|
B:TYR100
|
2.5
|
93.1
|
1.0
|
|
C
|
B:ASN101
|
2.5
|
0.9
|
1.0
|
|
NE2
|
B:GLN336
|
2.5
|
99.1
|
1.0
|
|
CD1
|
B:TYR1064
|
2.6
|
0.9
|
1.0
|
|
N
|
B:THR81
|
2.6
|
86.6
|
1.0
|
|
CE1
|
B:TYR1064
|
2.7
|
0.8
|
1.0
|
|
CD
|
B:GLN336
|
2.7
|
0.5
|
1.0
|
|
N
|
B:ALA371
|
2.8
|
0.6
|
1.0
|
|
CG2
|
B:ILE334
|
2.8
|
81.9
|
1.0
|
|
CG
|
B:GLN336
|
2.9
|
0.6
|
1.0
|
|
CG
|
B:LYS103
|
2.9
|
0.9
|
1.0
|
|
CA
|
B:GLY102
|
2.9
|
95.5
|
1.0
|
|
OD1
|
B:ASP1045
|
2.9
|
1.0
|
1.0
|
|
NH2
|
B:ARG1063
|
2.9
|
0.4
|
1.0
|
|
CA
|
B:ALA371
|
2.9
|
0.0
|
1.0
|
|
CB
|
B:ASN101
|
3.0
|
0.0
|
1.0
|
|
C
|
B:ILE80
|
3.0
|
82.9
|
1.0
|
|
O
|
B:ASN368
|
3.0
|
0.8
|
1.0
|
|
CA
|
B:LEU104
|
3.1
|
83.2
|
1.0
|
|
OE1
|
B:GLN336
|
3.1
|
0.1
|
1.0
|
|
CA
|
B:ILE179
|
3.1
|
0.6
|
1.0
|
|
CB
|
B:GLN336
|
3.2
|
91.2
|
1.0
|
|
O
|
B:GLY102
|
3.2
|
0.5
|
1.0
|
|
OE2
|
B:GLU79
|
3.2
|
0.9
|
1.0
|
|
O
|
B:THR367
|
3.2
|
0.1
|
1.0
|
|
CA
|
B:ALA370
|
3.2
|
0.1
|
1.0
|
|
OH
|
B:TYR1031
|
3.2
|
86.2
|
1.0
|
|
CD1
|
B:ILE334
|
3.3
|
96.4
|
1.0
|
|
OD2
|
B:ASP1045
|
3.3
|
83.7
|
1.0
|
|
O
|
B:GLY175
|
3.3
|
0.5
|
1.0
|
|
N
|
B:ALA370
|
3.3
|
0.5
|
1.0
|
|
N
|
B:PRO82
|
3.3
|
76.9
|
1.0
|
|
CD
|
B:ARG1063
|
3.3
|
0.2
|
1.0
|
|
CB
|
B:TYR100
|
3.4
|
93.0
|
1.0
|
|
O
|
B:PHE1046
|
3.4
|
92.0
|
1.0
|
|
CB
|
B:ALA371
|
3.4
|
0.9
|
1.0
|
|
CG
|
B:LEU104
|
3.4
|
82.1
|
1.0
|
|
CB
|
B:LEU104
|
3.5
|
83.2
|
1.0
|
|
CZ
|
B:ARG1063
|
3.5
|
0.7
|
1.0
|
|
C
|
B:ARG99
|
3.5
|
91.3
|
1.0
|
|
CB
|
B:ILE334
|
3.5
|
79.5
|
1.0
|
|
O
|
B:ASN101
|
3.6
|
1.0
|
1.0
|
|
CG
|
B:ASP1045
|
3.6
|
0.2
|
1.0
|
|
CG
|
B:TYR100
|
3.6
|
97.7
|
1.0
|
|
CG
|
B:ARG99
|
3.7
|
96.5
|
1.0
|
|
CE1
|
B:PHE1046
|
3.7
|
90.4
|
1.0
|
|
OH
|
B:TYR1064
|
3.7
|
0.3
|
1.0
|
|
CZ
|
B:TYR1064
|
3.7
|
0.1
|
1.0
|
|
CG
|
B:GLU79
|
3.8
|
95.2
|
1.0
|
|
O
|
B:LEU104
|
3.8
|
91.7
|
1.0
|
|
O
|
B:ILE179
|
3.8
|
0.4
|
1.0
|
|
CG
|
B:TYR1064
|
3.8
|
0.2
|
1.0
|
|
NH1
|
B:ARG1063
|
3.8
|
0.6
|
1.0
|
|
C
|
B:LEU104
|
3.8
|
82.3
|
1.0
|
|
CZ
|
B:PHE1046
|
3.8
|
0.9
|
1.0
|
|
CD
|
B:GLU79
|
3.9
|
0.7
|
1.0
|
|
NE
|
B:ARG1063
|
3.9
|
0.9
|
1.0
|
|
OD2
|
B:ASP1067
|
3.9
|
0.8
|
1.0
|
|
OE2
|
B:GLU372
|
3.9
|
0.9
|
1.0
|
|
N
|
B:ILE179
|
3.9
|
0.2
|
1.0
|
|
CB
|
B:ARG1063
|
3.9
|
84.3
|
1.0
|
|
CD2
|
B:TYR100
|
3.9
|
95.4
|
1.0
|
|
C
|
B:ILE179
|
3.9
|
0.6
|
1.0
|
|
CD1
|
B:LEU104
|
3.9
|
78.3
|
1.0
|
|
CG1
|
B:ILE334
|
3.9
|
86.8
|
1.0
|
|
CD
|
B:PRO82
|
3.9
|
89.9
|
1.0
|
|
CB
|
B:TYR1064
|
3.9
|
98.5
|
1.0
|
|
CD1
|
B:TYR100
|
4.0
|
0.2
|
1.0
|
|
O
|
B:ARG99
|
4.0
|
92.2
|
1.0
|
|
C
|
B:ALA371
|
4.1
|
0.4
|
1.0
|
|
O
|
B:TYR177
|
4.2
|
0.5
|
1.0
|
|
C
|
B:ASN368
|
4.2
|
0.7
|
1.0
|
|
CA
|
B:ARG99
|
4.2
|
90.7
|
1.0
|
|
N
|
B:TYR177
|
4.2
|
0.7
|
1.0
|
|
CA
|
B:TYR1064
|
4.2
|
98.3
|
1.0
|
|
CG
|
B:GLU372
|
4.2
|
0.8
|
1.0
|
|
CE1
|
B:TYR100
|
4.2
|
0.5
|
1.0
|
|
CD
|
B:GLU372
|
4.3
|
0.1
|
1.0
|
|
CG
|
B:ASN101
|
4.3
|
0.0
|
1.0
|
|
CA
|
B:PRO82
|
4.3
|
73.0
|
1.0
|
|
CB
|
B:TYR177
|
4.3
|
97.8
|
1.0
|
|
N
|
B:GLU372
|
4.3
|
0.9
|
1.0
|
|
CD
|
B:LYS103
|
4.4
|
1.0
|
1.0
|
|
ND2
|
B:ASN101
|
4.4
|
0.4
|
1.0
|
|
CG
|
B:ARG1063
|
4.4
|
94.4
|
1.0
|
|
C
|
B:THR367
|
4.4
|
0.5
|
1.0
|
|
CB
|
B:ALA370
|
4.4
|
1.0
|
1.0
|
|
CA
|
B:ILE80
|
4.4
|
81.0
|
1.0
|
|
C
|
B:GLY175
|
4.4
|
0.3
|
1.0
|
|
C
|
B:PRO82
|
4.4
|
81.2
|
1.0
|
|
C
|
B:ALA369
|
4.4
|
1.0
|
1.0
|
|
CZ
|
B:TYR100
|
4.5
|
0.1
|
1.0
|
|
CE2
|
B:TYR100
|
4.5
|
98.1
|
1.0
|
|
O
|
B:PRO82
|
4.5
|
86.9
|
1.0
|
|
CD2
|
B:LEU104
|
4.5
|
80.6
|
1.0
|
|
CB
|
B:ARG99
|
4.5
|
93.4
|
1.0
|
|
CD1
|
B:PHE1046
|
4.5
|
83.7
|
1.0
|
|
CA
|
B:ASN368
|
4.5
|
0.0
|
1.0
|
|
C
|
B:PHE1046
|
4.5
|
86.9
|
1.0
|
|
N
|
B:TYR1064
|
4.6
|
99.7
|
1.0
|
|
N
|
B:ILE80
|
4.6
|
93.7
|
1.0
|
|
CZ
|
B:TYR1031
|
4.6
|
77.3
|
1.0
|
|
N
|
B:ALA83
|
4.6
|
80.5
|
1.0
|
|
CA
|
B:GLN336
|
4.7
|
95.4
|
1.0
|
|
C
|
B:TYR177
|
4.7
|
0.4
|
1.0
|
|
C
|
B:ARG1063
|
4.7
|
0.5
|
1.0
|
|
CD
|
B:ARG99
|
4.7
|
0.5
|
1.0
|
|
CD2
|
B:TYR177
|
4.7
|
98.0
|
1.0
|
|
CA
|
B:LYS176
|
4.7
|
0.4
|
1.0
|
|
CA
|
B:TYR177
|
4.8
|
0.5
|
1.0
|
|
O
|
B:ARG1063
|
4.8
|
0.3
|
1.0
|
|
CE2
|
B:TYR1064
|
4.8
|
92.2
|
1.0
|
|
CD2
|
B:LEU1049
|
4.8
|
80.4
|
1.0
|
|
CA
|
B:ILE334
|
4.8
|
80.7
|
1.0
|
|
CA
|
B:ALA369
|
4.8
|
0.4
|
1.0
|
|
N
|
B:PHE1046
|
4.9
|
89.5
|
1.0
|
|
O
|
B:LEU1060
|
4.9
|
85.8
|
1.0
|
|
N
|
B:ILE105
|
4.9
|
82.0
|
1.0
|
|
CE2
|
B:PHE1046
|
4.9
|
99.0
|
1.0
|
|
CE
|
B:LYS103
|
4.9
|
0.0
|
1.0
|
|
N
|
B:GLN336
|
4.9
|
94.6
|
1.0
|
|
OH
|
B:TYR100
|
4.9
|
0.4
|
1.0
|
|
CD2
|
B:TYR1064
|
4.9
|
99.0
|
1.0
|
|
N
|
B:ASN368
|
4.9
|
0.0
|
1.0
|
|
N
|
B:LYS180
|
5.0
|
0.2
|
1.0
|
|
CA
|
B:GLY175
|
5.0
|
0.3
|
1.0
|
|
O
|
B:ALA371
|
5.0
|
0.7
|
1.0
|
|
Calcium binding site 2 out
of 2 in 5w0u
Go back to
Calcium Binding Sites List in 5w0u
Calcium binding site 2 out
of 2 in the Crystal Structure of Mbp Fused Activation-Induced Cytidine Deaminase (Aid) in Complex with Dcmp
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Crystal Structure of Mbp Fused Activation-Induced Cytidine Deaminase (Aid) in Complex with Dcmp within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca2003
b:97.4
occ:1.00
|
C
|
A:LYS103
|
0.8
|
92.1
|
1.0
|
|
O
|
A:THR81
|
0.9
|
88.2
|
1.0
|
|
CA
|
A:THR81
|
0.9
|
79.7
|
1.0
|
|
CG2
|
A:ILE179
|
1.0
|
0.1
|
1.0
|
|
CB
|
A:THR81
|
1.2
|
88.9
|
1.0
|
|
N
|
A:LEU104
|
1.2
|
86.6
|
1.0
|
|
N
|
A:ASN101
|
1.2
|
87.7
|
1.0
|
|
O
|
A:ALA370
|
1.3
|
0.3
|
1.0
|
|
CA
|
A:LYS103
|
1.3
|
97.6
|
1.0
|
|
C
|
A:TYR100
|
1.3
|
92.9
|
1.0
|
|
CG1
|
A:ILE179
|
1.4
|
0.6
|
1.0
|
|
O
|
A:LYS103
|
1.5
|
88.3
|
1.0
|
|
CD1
|
A:ILE179
|
1.5
|
0.4
|
1.0
|
|
C
|
A:THR81
|
1.5
|
83.2
|
1.0
|
|
N
|
A:LYS103
|
1.6
|
88.7
|
1.0
|
|
O
|
A:ILE80
|
1.7
|
79.5
|
1.0
|
|
O
|
A:TYR100
|
1.9
|
0.6
|
1.0
|
|
CA
|
A:TYR100
|
1.9
|
86.7
|
1.0
|
|
CB
|
A:ILE179
|
2.0
|
0.3
|
1.0
|
|
C
|
A:ALA370
|
2.0
|
0.1
|
1.0
|
|
N
|
A:TYR100
|
2.0
|
82.5
|
1.0
|
|
N
|
A:THR81
|
2.1
|
84.6
|
1.0
|
|
OG1
|
A:THR81
|
2.1
|
0.1
|
1.0
|
|
CG2
|
A:THR81
|
2.2
|
88.1
|
1.0
|
|
NE2
|
A:GLN336
|
2.3
|
92.2
|
1.0
|
|
CB
|
A:LYS103
|
2.4
|
0.8
|
1.0
|
|
CA
|
A:LEU104
|
2.4
|
69.5
|
1.0
|
|
CA
|
A:ASN101
|
2.4
|
0.8
|
1.0
|
|
C
|
A:ILE80
|
2.5
|
80.6
|
1.0
|
|
N
|
A:GLY102
|
2.5
|
0.0
|
1.0
|
|
NH2
|
A:ARG1063
|
2.5
|
0.1
|
1.0
|
|
CE1
|
A:TYR1064
|
2.5
|
0.4
|
1.0
|
|
CG2
|
A:ILE334
|
2.5
|
64.6
|
1.0
|
|
N
|
A:ALA371
|
2.6
|
0.5
|
1.0
|
|
CD
|
A:GLN336
|
2.6
|
84.5
|
1.0
|
|
CD1
|
A:TYR1064
|
2.6
|
1.0
|
1.0
|
|
N
|
A:PRO82
|
2.6
|
81.7
|
1.0
|
|
CG
|
A:GLN336
|
2.7
|
99.5
|
1.0
|
|
C
|
A:GLY102
|
2.8
|
96.1
|
1.0
|
|
C
|
A:ASN101
|
2.9
|
97.5
|
1.0
|
|
OD1
|
A:ASP1045
|
2.9
|
0.9
|
1.0
|
|
CA
|
A:ALA371
|
2.9
|
86.2
|
1.0
|
|
CB
|
A:LEU104
|
2.9
|
74.7
|
1.0
|
|
CD
|
A:ARG1063
|
2.9
|
0.9
|
1.0
|
|
CZ
|
A:ARG1063
|
2.9
|
0.3
|
1.0
|
|
CB
|
A:GLN336
|
3.0
|
87.5
|
1.0
|
|
CG
|
A:LEU104
|
3.0
|
74.2
|
1.0
|
|
O
|
A:THR367
|
3.0
|
0.5
|
1.0
|
|
N
|
A:ALA370
|
3.0
|
0.2
|
1.0
|
|
O
|
A:ASN368
|
3.0
|
0.7
|
1.0
|
|
CA
|
A:ILE179
|
3.0
|
0.4
|
1.0
|
|
CD1
|
A:ILE334
|
3.1
|
86.9
|
1.0
|
|
CA
|
A:ALA370
|
3.1
|
98.1
|
1.0
|
|
C
|
A:ARG99
|
3.1
|
86.3
|
1.0
|
|
OH
|
A:TYR1031
|
3.1
|
94.7
|
1.0
|
|
OD2
|
A:ASP1045
|
3.2
|
98.4
|
1.0
|
|
CB
|
A:TYR100
|
3.2
|
78.6
|
1.0
|
|
OE1
|
A:GLN336
|
3.2
|
84.9
|
1.0
|
|
CB
|
A:ILE334
|
3.2
|
84.7
|
1.0
|
|
CD
|
A:PRO82
|
3.2
|
84.4
|
1.0
|
|
C
|
A:LEU104
|
3.3
|
74.6
|
1.0
|
|
NE
|
A:ARG1063
|
3.3
|
1.0
|
1.0
|
|
CG
|
A:LYS103
|
3.3
|
94.0
|
1.0
|
|
CG
|
A:ARG99
|
3.3
|
95.8
|
1.0
|
|
CA
|
A:GLY102
|
3.3
|
0.7
|
1.0
|
|
NH1
|
A:ARG1063
|
3.4
|
0.5
|
1.0
|
|
O
|
A:LEU104
|
3.4
|
84.0
|
1.0
|
|
O
|
A:GLY175
|
3.4
|
0.9
|
1.0
|
|
O
|
A:PHE1046
|
3.4
|
88.4
|
1.0
|
|
CB
|
A:ASN101
|
3.4
|
97.8
|
1.0
|
|
CG
|
A:TYR100
|
3.5
|
82.0
|
1.0
|
|
CB
|
A:ALA371
|
3.5
|
98.5
|
1.0
|
|
CZ
|
A:TYR1064
|
3.5
|
0.1
|
1.0
|
|
O
|
A:ILE179
|
3.5
|
95.9
|
1.0
|
|
O
|
A:GLY102
|
3.5
|
97.9
|
1.0
|
|
CD1
|
A:LEU104
|
3.5
|
65.8
|
1.0
|
|
OE2
|
A:GLU79
|
3.5
|
0.0
|
1.0
|
|
CG
|
A:TYR1064
|
3.6
|
99.2
|
1.0
|
|
CG
|
A:ASP1045
|
3.6
|
0.2
|
1.0
|
|
CA
|
A:PRO82
|
3.6
|
78.1
|
1.0
|
|
O
|
A:ARG99
|
3.6
|
90.6
|
1.0
|
|
CB
|
A:ARG1063
|
3.6
|
95.9
|
1.0
|
|
OH
|
A:TYR1064
|
3.6
|
0.9
|
1.0
|
|
CA
|
A:ARG99
|
3.6
|
81.5
|
1.0
|
|
CB
|
A:TYR1064
|
3.7
|
0.6
|
1.0
|
|
CG1
|
A:ILE334
|
3.7
|
81.1
|
1.0
|
|
CD1
|
A:TYR100
|
3.7
|
0.4
|
1.0
|
|
C
|
A:PRO82
|
3.7
|
77.5
|
1.0
|
|
C
|
A:ILE179
|
3.8
|
0.9
|
1.0
|
|
CG
|
A:GLU79
|
3.9
|
86.4
|
1.0
|
|
CE1
|
A:PHE1046
|
3.9
|
87.8
|
1.0
|
|
N
|
A:ILE179
|
3.9
|
96.9
|
1.0
|
|
CG
|
A:ARG1063
|
3.9
|
0.7
|
1.0
|
|
CD2
|
A:TYR100
|
3.9
|
85.5
|
1.0
|
|
C
|
A:ALA371
|
4.0
|
99.5
|
1.0
|
|
O
|
A:PRO82
|
4.0
|
80.4
|
1.0
|
|
O
|
A:ASN101
|
4.0
|
98.8
|
1.0
|
|
C
|
A:ASN368
|
4.0
|
0.2
|
1.0
|
|
N
|
A:ALA83
|
4.0
|
76.2
|
1.0
|
|
CE1
|
A:TYR100
|
4.0
|
84.8
|
1.0
|
|
CA
|
A:ILE80
|
4.0
|
75.2
|
1.0
|
|
CA
|
A:TYR1064
|
4.0
|
99.3
|
1.0
|
|
CB
|
A:ARG99
|
4.0
|
84.8
|
1.0
|
|
CD2
|
A:LEU104
|
4.1
|
78.3
|
1.0
|
|
CB
|
A:TYR177
|
4.1
|
82.8
|
1.0
|
|
C
|
A:THR367
|
4.1
|
0.9
|
1.0
|
|
O
|
A:TYR177
|
4.1
|
0.6
|
1.0
|
|
CZ
|
A:PHE1046
|
4.1
|
0.3
|
1.0
|
|
N
|
A:TYR177
|
4.1
|
0.2
|
1.0
|
|
OD2
|
A:ASP1067
|
4.2
|
0.9
|
1.0
|
|
C
|
A:ALA369
|
4.2
|
0.6
|
1.0
|
|
CB
|
A:ALA370
|
4.2
|
98.0
|
1.0
|
|
CD
|
A:GLU79
|
4.2
|
0.3
|
1.0
|
|
N
|
A:GLU372
|
4.2
|
0.1
|
1.0
|
|
N
|
A:ILE80
|
4.3
|
79.2
|
1.0
|
|
N
|
A:TYR1064
|
4.3
|
0.4
|
1.0
|
|
CA
|
A:ASN368
|
4.4
|
0.0
|
1.0
|
|
N
|
A:ILE105
|
4.4
|
72.3
|
1.0
|
|
CZ
|
A:TYR100
|
4.4
|
94.4
|
1.0
|
|
CA
|
A:GLN336
|
4.4
|
88.0
|
1.0
|
|
CD2
|
A:TYR177
|
4.4
|
90.9
|
1.0
|
|
CZ
|
A:TYR1031
|
4.5
|
91.5
|
1.0
|
|
O
|
A:LEU1060
|
4.5
|
90.9
|
1.0
|
|
CE2
|
A:TYR100
|
4.5
|
96.5
|
1.0
|
|
C
|
A:ARG1063
|
4.6
|
0.9
|
1.0
|
|
CA
|
A:TYR177
|
4.6
|
98.8
|
1.0
|
|
C
|
A:TYR177
|
4.6
|
97.4
|
1.0
|
|
C
|
A:GLY175
|
4.6
|
0.2
|
1.0
|
|
CG
|
A:ASN101
|
4.6
|
0.8
|
1.0
|
|
CD
|
A:ARG99
|
4.6
|
0.7
|
1.0
|
|
CE2
|
A:TYR1064
|
4.6
|
0.4
|
1.0
|
|
C
|
A:PHE1046
|
4.6
|
87.4
|
1.0
|
|
CA
|
A:ILE334
|
4.6
|
83.1
|
1.0
|
|
CD2
|
A:TYR1064
|
4.7
|
96.0
|
1.0
|
|
ND2
|
A:ASN101
|
4.7
|
0.9
|
1.0
|
|
CG
|
A:PRO82
|
4.7
|
74.6
|
1.0
|
|
CG1
|
A:ILE80
|
4.7
|
69.4
|
1.0
|
|
CD1
|
A:PHE1046
|
4.7
|
79.2
|
1.0
|
|
CD
|
A:LYS103
|
4.7
|
0.0
|
1.0
|
|
N
|
A:ASN368
|
4.7
|
0.9
|
1.0
|
|
CE1
|
A:PHE170
|
4.7
|
98.4
|
1.0
|
|
N
|
A:GLN336
|
4.7
|
88.1
|
1.0
|
|
CA
|
A:ALA83
|
4.7
|
79.4
|
1.0
|
|
CA
|
A:ALA369
|
4.7
|
0.0
|
1.0
|
|
O
|
A:ARG1063
|
4.8
|
0.8
|
1.0
|
|
CA
|
A:ARG1063
|
4.8
|
0.1
|
1.0
|
|
CA
|
A:LYS176
|
4.8
|
0.8
|
1.0
|
|
NE
|
A:ARG99
|
4.8
|
0.8
|
1.0
|
|
CB
|
A:ALA83
|
4.8
|
78.0
|
1.0
|
|
OD1
|
A:ASN333
|
4.8
|
91.7
|
1.0
|
|
CG
|
A:TYR177
|
4.8
|
90.4
|
1.0
|
|
O
|
A:ALA371
|
4.9
|
0.4
|
1.0
|
|
CB
|
A:ILE80
|
4.9
|
75.4
|
1.0
|
|
O
|
A:VAL98
|
4.9
|
82.6
|
1.0
|
|
N
|
A:LYS180
|
4.9
|
0.5
|
1.0
|
|
N
|
A:ALA369
|
4.9
|
0.8
|
1.0
|
|
C
|
A:ASP178
|
4.9
|
97.7
|
1.0
|
|
N
|
A:PHE1046
|
5.0
|
90.4
|
1.0
|
|
CB
|
A:ASP1045
|
5.0
|
0.4
|
1.0
|
|
CB
|
A:PRO82
|
5.0
|
77.3
|
1.0
|
|
CD2
|
A:LEU1060
|
5.0
|
0.0
|
1.0
|
|
N
|
A:ARG99
|
5.0
|
69.9
|
1.0
|
|
Reference:
Q.Qiao,
L.Wang,
F.L.Meng,
J.K.Hwang,
F.W.Alt,
H.Wu.
Aid Recognizes Structured Dna For Class Switch Recombination. Mol. Cell V. 67 361 2017.
ISSN: ISSN 1097-4164
PubMed: 28757211
DOI: 10.1016/J.MOLCEL.2017.06.034
Page generated: Mon Jul 15 12:41:16 2024
|
