Calcium in PDB 5x2b: Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap
Protein crystallography data
The structure of Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap, PDB code: 5x2b
was solved by
M.Kanekiyo,
T.Teramoto,
Y.Kakuta,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
50.00 /
2.08
|
|
Space group
|
P 1 21 1
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
166.174,
81.127,
166.180,
90.00,
119.95,
90.00
|
|
R / Rfree (%)
|
22.1 /
23.6
|
Calcium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Binding sites:
The binding sites of Calcium atom in the Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap
(pdb code 5x2b). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 20 binding sites of Calcium where determined in the
Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap, PDB code: 5x2b:
Jump to Calcium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Calcium binding site 1 out
of 20 in 5x2b
Go back to
Calcium Binding Sites List in 5x2b
Calcium binding site 1 out
of 20 in the Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca302
b:44.1
occ:1.00
|
O
|
A:ASP171
|
2.4
|
29.9
|
1.0
|
|
O
|
A:HOH523
|
2.5
|
28.4
|
1.0
|
|
O
|
A:VAL174
|
2.5
|
24.7
|
1.0
|
|
O
|
C:HOH456
|
2.8
|
30.2
|
1.0
|
|
O
|
A:LYS169
|
2.9
|
28.5
|
1.0
|
|
OE1
|
C:GLU167
|
3.0
|
52.2
|
1.0
|
|
C
|
A:ASP171
|
3.4
|
34.0
|
1.0
|
|
OE2
|
C:GLU167
|
3.5
|
49.4
|
1.0
|
|
CD
|
C:GLU167
|
3.6
|
36.8
|
1.0
|
|
C
|
A:VAL174
|
3.7
|
27.1
|
1.0
|
|
O
|
C:HOH510
|
3.8
|
57.7
|
1.0
|
|
C
|
A:LYS169
|
3.9
|
44.7
|
1.0
|
|
C
|
A:ASN170
|
3.9
|
26.6
|
1.0
|
|
N
|
A:ASP171
|
4.0
|
27.9
|
1.0
|
|
CA
|
A:LYS172
|
4.1
|
32.5
|
1.0
|
|
CA
|
A:ASN170
|
4.2
|
29.9
|
1.0
|
|
O
|
A:ASN170
|
4.2
|
31.9
|
1.0
|
|
N
|
A:LYS172
|
4.2
|
30.4
|
1.0
|
|
C
|
A:LYS172
|
4.3
|
24.9
|
1.0
|
|
CA
|
A:ASP171
|
4.4
|
20.1
|
1.0
|
|
N
|
A:VAL174
|
4.4
|
26.4
|
1.0
|
|
CB
|
A:VAL174
|
4.4
|
21.5
|
1.0
|
|
N
|
A:ASN170
|
4.5
|
34.7
|
1.0
|
|
CA
|
A:VAL174
|
4.5
|
24.3
|
1.0
|
|
O
|
A:LYS172
|
4.5
|
32.5
|
1.0
|
|
O
|
A:HOH468
|
4.7
|
29.5
|
1.0
|
|
N
|
A:LEU175
|
4.7
|
21.5
|
1.0
|
|
CG1
|
A:VAL174
|
4.8
|
29.5
|
1.0
|
|
CA
|
A:LYS169
|
4.9
|
31.1
|
1.0
|
|
CA
|
A:LEU175
|
4.9
|
26.1
|
1.0
|
|
N
|
A:ASN173
|
5.0
|
20.3
|
1.0
|
|
CG
|
C:GLU167
|
5.0
|
31.3
|
1.0
|
|
Calcium binding site 2 out
of 20 in 5x2b
Go back to
Calcium Binding Sites List in 5x2b
Calcium binding site 2 out
of 20 in the Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca302
b:46.5
occ:1.00
|
O
|
A:HOH429
|
2.2
|
55.7
|
1.0
|
|
O
|
A:GLU98
|
2.3
|
49.4
|
1.0
|
|
O
|
A:HOH467
|
2.4
|
39.6
|
1.0
|
|
O
|
B:HOH514
|
2.6
|
50.8
|
1.0
|
|
OE1
|
A:GLU98
|
2.6
|
46.8
|
1.0
|
|
O
|
A:HOH528
|
2.6
|
50.6
|
1.0
|
|
OD2
|
B:ASP160
|
2.8
|
53.9
|
1.0
|
|
O
|
B:HOH471
|
2.9
|
35.8
|
1.0
|
|
O
|
A:HOH484
|
3.1
|
33.0
|
1.0
|
|
C
|
A:GLU98
|
3.3
|
32.5
|
1.0
|
|
CD
|
A:GLU98
|
3.3
|
47.8
|
1.0
|
|
OE2
|
A:GLU98
|
3.7
|
42.0
|
1.0
|
|
CG
|
B:ASP160
|
3.7
|
35.0
|
1.0
|
|
CA
|
A:MET99
|
3.9
|
32.4
|
1.0
|
|
N
|
A:MET99
|
4.0
|
16.7
|
1.0
|
|
OD1
|
B:ASP160
|
4.2
|
31.3
|
1.0
|
|
CA
|
A:GLU98
|
4.3
|
15.4
|
1.0
|
|
OD1
|
A:ASP31
|
4.4
|
21.9
|
1.0
|
|
CG
|
A:GLU98
|
4.4
|
33.2
|
1.0
|
|
C
|
A:MET99
|
4.5
|
36.5
|
1.0
|
|
CB
|
A:GLU98
|
4.5
|
29.4
|
1.0
|
|
O
|
A:LEU100
|
4.6
|
29.3
|
1.0
|
|
O
|
A:HOH532
|
4.6
|
36.3
|
1.0
|
|
O
|
A:MET99
|
4.6
|
39.8
|
1.0
|
|
OD2
|
A:ASP31
|
4.7
|
33.2
|
1.0
|
|
NZ
|
A:LYS105
|
4.8
|
20.9
|
1.0
|
|
CB
|
B:ASP160
|
4.8
|
19.5
|
1.0
|
|
O
|
A:HOH417
|
4.9
|
30.5
|
1.0
|
|
CG
|
A:ASP31
|
5.0
|
28.4
|
1.0
|
|
Calcium binding site 3 out
of 20 in 5x2b
Go back to
Calcium Binding Sites List in 5x2b
Calcium binding site 3 out
of 20 in the Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca303
b:53.5
occ:1.00
|
N
|
A:ASP251
|
2.4
|
39.0
|
1.0
|
|
CB
|
A:ASP251
|
2.4
|
34.2
|
1.0
|
|
OD1
|
A:ASP120
|
2.6
|
41.8
|
1.0
|
|
O
|
A:VAL248
|
2.8
|
41.2
|
1.0
|
|
CA
|
A:ASP251
|
2.9
|
41.0
|
1.0
|
|
O
|
A:HOH449
|
3.0
|
40.6
|
1.0
|
|
CG
|
A:ASP120
|
3.0
|
39.6
|
1.0
|
|
N
|
A:GLY250
|
3.3
|
46.8
|
1.0
|
|
OD2
|
A:ASP120
|
3.5
|
34.3
|
1.0
|
|
C
|
A:GLY250
|
3.5
|
42.0
|
1.0
|
|
C
|
A:VAL248
|
3.6
|
41.4
|
1.0
|
|
CB
|
A:ASP120
|
3.7
|
18.8
|
1.0
|
|
CG
|
A:ASP251
|
3.8
|
43.0
|
1.0
|
|
CG1
|
A:VAL248
|
3.8
|
38.9
|
1.0
|
|
NH2
|
A:ARG116
|
3.8
|
31.5
|
1.0
|
|
C
|
A:VAL249
|
3.9
|
54.0
|
1.0
|
|
CA
|
A:GLY250
|
4.0
|
34.4
|
1.0
|
|
C
|
A:ASP251
|
4.1
|
48.5
|
1.0
|
|
O3P
|
A:A3P301
|
4.1
|
28.5
|
1.0
|
|
CA
|
A:VAL249
|
4.1
|
47.5
|
1.0
|
|
N
|
A:VAL249
|
4.1
|
30.7
|
1.0
|
|
N
|
A:TRP252
|
4.2
|
42.3
|
1.0
|
|
OD2
|
A:ASP251
|
4.3
|
52.2
|
1.0
|
|
NH2
|
A:ARG245
|
4.5
|
50.6
|
1.0
|
|
CA
|
A:VAL248
|
4.5
|
50.0
|
1.0
|
|
CA
|
A:ASP120
|
4.6
|
23.3
|
1.0
|
|
O
|
A:GLY250
|
4.6
|
39.3
|
1.0
|
|
OD1
|
A:ASP251
|
4.6
|
48.6
|
1.0
|
|
N
|
A:VAL248
|
4.6
|
41.6
|
1.0
|
|
CZ
|
A:ARG116
|
4.8
|
40.8
|
1.0
|
|
O
|
A:HOH477
|
4.8
|
33.1
|
1.0
|
|
CB
|
A:VAL248
|
4.8
|
40.3
|
1.0
|
|
O
|
A:VAL249
|
4.9
|
40.4
|
1.0
|
|
Calcium binding site 4 out
of 20 in 5x2b
Go back to
Calcium Binding Sites List in 5x2b
Calcium binding site 4 out
of 20 in the Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca302
b:40.2
occ:1.00
|
O
|
B:HOH403
|
2.2
|
35.7
|
1.0
|
|
O
|
B:HOH470
|
2.3
|
39.2
|
1.0
|
|
O
|
B:GLU98
|
2.4
|
23.7
|
1.0
|
|
O
|
B:HOH459
|
2.5
|
33.0
|
1.0
|
|
OE1
|
B:GLU98
|
2.6
|
47.3
|
1.0
|
|
O
|
A:HOH464
|
2.6
|
30.0
|
1.0
|
|
O
|
A:HOH425
|
2.9
|
29.5
|
1.0
|
|
O
|
B:HOH526
|
3.1
|
44.9
|
1.0
|
|
C
|
B:GLU98
|
3.4
|
23.0
|
1.0
|
|
CD
|
B:GLU98
|
3.4
|
36.7
|
1.0
|
|
O
|
B:HOH506
|
3.5
|
55.0
|
1.0
|
|
OE2
|
B:GLU98
|
3.6
|
41.7
|
1.0
|
|
CA
|
B:MET99
|
3.6
|
27.9
|
1.0
|
|
O
|
B:MET99
|
3.9
|
36.8
|
1.0
|
|
OD1
|
A:ASP160
|
3.9
|
44.3
|
1.0
|
|
C
|
B:MET99
|
3.9
|
26.6
|
1.0
|
|
N
|
B:MET99
|
4.0
|
25.4
|
1.0
|
|
OD2
|
B:ASP31
|
4.2
|
34.3
|
1.0
|
|
O
|
B:HOH465
|
4.2
|
41.9
|
1.0
|
|
OD1
|
B:ASP31
|
4.3
|
35.7
|
1.0
|
|
CG
|
A:ASP160
|
4.4
|
40.3
|
1.0
|
|
O
|
B:LEU100
|
4.4
|
29.9
|
1.0
|
|
O
|
B:HOH528
|
4.4
|
51.0
|
1.0
|
|
OD2
|
A:ASP160
|
4.5
|
34.3
|
1.0
|
|
CG
|
B:ASP31
|
4.6
|
19.9
|
1.0
|
|
CA
|
B:GLU98
|
4.6
|
18.6
|
1.0
|
|
CG
|
B:GLU98
|
4.7
|
33.1
|
1.0
|
|
NZ
|
B:LYS105
|
4.8
|
27.4
|
1.0
|
|
N
|
B:LEU100
|
4.8
|
20.5
|
1.0
|
|
CB
|
B:MET99
|
4.9
|
24.4
|
1.0
|
|
CB
|
B:GLU98
|
5.0
|
32.9
|
1.0
|
|
Calcium binding site 5 out
of 20 in 5x2b
Go back to
Calcium Binding Sites List in 5x2b
Calcium binding site 5 out
of 20 in the Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 5 of Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca303
b:44.8
occ:1.00
|
O
|
B:HOH444
|
2.4
|
75.0
|
1.0
|
|
O
|
B:TYR155
|
2.5
|
29.6
|
1.0
|
|
CB
|
B:TYR155
|
3.1
|
21.5
|
1.0
|
|
CA
|
B:TYR155
|
3.2
|
28.3
|
1.0
|
|
C
|
B:TYR155
|
3.2
|
32.3
|
1.0
|
|
O
|
B:HIS94
|
3.3
|
29.5
|
1.0
|
|
CD1
|
B:TYR155
|
3.3
|
36.7
|
1.0
|
|
ND1
|
B:HIS161
|
3.4
|
33.2
|
1.0
|
|
CG
|
B:TYR155
|
3.6
|
35.9
|
1.0
|
|
N
|
B:ASN96
|
3.6
|
40.1
|
1.0
|
|
O
|
B:HOH456
|
3.7
|
28.3
|
1.0
|
|
CE1
|
B:HIS161
|
3.7
|
26.6
|
1.0
|
|
C
|
B:LEU95
|
4.0
|
27.9
|
1.0
|
|
CB
|
B:ASN96
|
4.1
|
27.1
|
1.0
|
|
CA
|
B:LEU95
|
4.2
|
17.0
|
1.0
|
|
CA
|
B:ASN96
|
4.3
|
30.6
|
1.0
|
|
CE
|
B:MET99
|
4.4
|
50.9
|
1.0
|
|
CG
|
B:ASN96
|
4.4
|
21.6
|
1.0
|
|
C
|
B:HIS94
|
4.4
|
20.8
|
1.0
|
|
CE1
|
B:TYR155
|
4.5
|
19.9
|
1.0
|
|
N
|
B:GLY156
|
4.5
|
20.6
|
1.0
|
|
N
|
B:TYR155
|
4.6
|
28.3
|
1.0
|
|
CG2
|
B:ILE16
|
4.6
|
15.1
|
1.0
|
|
CD1
|
B:ILE16
|
4.6
|
23.8
|
1.0
|
|
ND2
|
B:ASN96
|
4.6
|
32.4
|
1.0
|
|
CG
|
B:HIS161
|
4.7
|
24.8
|
1.0
|
|
CE2
|
B:PHE18
|
4.8
|
31.9
|
1.0
|
|
O
|
B:LEU95
|
4.8
|
31.7
|
1.0
|
|
N
|
B:LEU95
|
4.8
|
23.9
|
1.0
|
|
CZ
|
B:PHE18
|
4.9
|
23.2
|
1.0
|
|
O
|
B:HOH455
|
4.9
|
48.8
|
1.0
|
|
OD1
|
B:ASN96
|
5.0
|
22.4
|
1.0
|
|
CD2
|
B:TYR155
|
5.0
|
37.5
|
1.0
|
|
Calcium binding site 6 out
of 20 in 5x2b
Go back to
Calcium Binding Sites List in 5x2b
Calcium binding site 6 out
of 20 in the Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 6 of Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca304
b:69.0
occ:1.00
|
O
|
B:ASN132
|
2.1
|
37.9
|
1.0
|
|
O
|
B:LEU135
|
2.1
|
38.4
|
1.0
|
|
NH2
|
D:ARG211
|
2.5
|
62.0
|
1.0
|
|
O
|
B:TYR129
|
2.6
|
46.0
|
1.0
|
|
C
|
B:ASN132
|
2.7
|
26.7
|
1.0
|
|
NH1
|
D:ARG211
|
2.7
|
54.2
|
1.0
|
|
O
|
D:HOH429
|
2.7
|
43.0
|
1.0
|
|
CZ
|
D:ARG211
|
3.0
|
64.7
|
1.0
|
|
N
|
B:PRO133
|
3.2
|
36.4
|
1.0
|
|
C
|
B:LEU135
|
3.2
|
43.7
|
1.0
|
|
CA
|
B:PRO133
|
3.3
|
30.9
|
1.0
|
|
N
|
B:ASN132
|
3.5
|
53.1
|
1.0
|
|
C
|
B:TYR129
|
3.6
|
52.3
|
1.0
|
|
CA
|
B:ASN132
|
3.7
|
33.5
|
1.0
|
|
N
|
B:LEU135
|
3.8
|
38.4
|
1.0
|
|
C
|
B:PRO133
|
3.9
|
38.4
|
1.0
|
|
N
|
B:SER137
|
3.9
|
42.3
|
1.0
|
|
CA
|
B:LEU135
|
4.0
|
18.1
|
1.0
|
|
O
|
B:HOH530
|
4.1
|
45.5
|
1.0
|
|
CB
|
B:LEU135
|
4.2
|
24.9
|
1.0
|
|
N
|
B:PRO136
|
4.2
|
33.0
|
1.0
|
|
O
|
B:ARG130
|
4.2
|
48.2
|
1.0
|
|
C
|
B:ARG130
|
4.3
|
45.3
|
1.0
|
|
NE
|
D:ARG211
|
4.3
|
83.2
|
1.0
|
|
C
|
B:ASP131
|
4.3
|
50.3
|
1.0
|
|
O
|
B:PRO133
|
4.3
|
42.9
|
1.0
|
|
CA
|
B:TYR129
|
4.4
|
43.8
|
1.0
|
|
N
|
B:ASN134
|
4.5
|
40.6
|
1.0
|
|
N
|
B:ASP131
|
4.5
|
42.0
|
1.0
|
|
N
|
B:ARG130
|
4.5
|
33.8
|
1.0
|
|
CD
|
B:PRO133
|
4.5
|
36.5
|
1.0
|
|
O
|
B:TYR128
|
4.5
|
39.3
|
1.0
|
|
CB
|
B:ASN132
|
4.6
|
35.4
|
1.0
|
|
CA
|
B:PRO136
|
4.6
|
40.8
|
1.0
|
|
CA
|
B:SER137
|
4.6
|
47.0
|
1.0
|
|
C
|
B:PRO136
|
4.6
|
40.2
|
1.0
|
|
CB
|
B:SER137
|
4.6
|
42.0
|
1.0
|
|
CB
|
B:PRO133
|
4.7
|
42.7
|
1.0
|
|
CA
|
B:ARG130
|
4.7
|
33.8
|
1.0
|
|
CA
|
B:ASP131
|
4.9
|
40.0
|
1.0
|
|
C
|
B:ASN134
|
5.0
|
40.6
|
1.0
|
|
Calcium binding site 7 out
of 20 in 5x2b
Go back to
Calcium Binding Sites List in 5x2b
Calcium binding site 7 out
of 20 in the Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 7 of Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Ca302
b:47.2
occ:1.00
|
O
|
D:GLU98
|
2.5
|
27.9
|
0.6
|
|
O
|
D:HOH442
|
2.5
|
42.2
|
1.0
|
|
O
|
D:HOH440
|
2.6
|
29.0
|
1.0
|
|
O
|
E:HOH518
|
2.6
|
41.0
|
1.0
|
|
O
|
D:GLU98
|
2.7
|
28.2
|
0.4
|
|
O
|
E:HOH494
|
2.8
|
47.6
|
1.0
|
|
OE2
|
D:GLU98
|
3.1
|
29.5
|
0.4
|
|
C
|
D:GLU98
|
3.6
|
26.4
|
0.6
|
|
O
|
D:HOH445
|
3.7
|
36.3
|
1.0
|
|
C
|
D:GLU98
|
3.7
|
26.4
|
0.4
|
|
CD
|
D:GLU98
|
3.9
|
33.2
|
0.4
|
|
CA
|
D:MET99
|
3.9
|
17.7
|
1.0
|
|
OD2
|
D:ASP31
|
4.0
|
34.6
|
1.0
|
|
O
|
D:LEU100
|
4.2
|
31.2
|
1.0
|
|
CG
|
D:GLU98
|
4.2
|
21.0
|
0.4
|
|
N
|
D:MET99
|
4.3
|
29.9
|
1.0
|
|
C
|
D:MET99
|
4.3
|
28.6
|
1.0
|
|
O
|
D:HOH495
|
4.4
|
36.5
|
1.0
|
|
OD1
|
D:ASP31
|
4.4
|
40.7
|
1.0
|
|
O
|
D:MET99
|
4.4
|
33.7
|
1.0
|
|
CG
|
D:ASP31
|
4.6
|
32.4
|
1.0
|
|
OD1
|
E:ASP160
|
4.6
|
36.0
|
1.0
|
|
O
|
D:HOH540
|
4.7
|
58.7
|
1.0
|
|
NZ
|
D:LYS105
|
4.7
|
39.2
|
1.0
|
|
CA
|
D:GLU98
|
4.7
|
27.8
|
0.6
|
|
CA
|
D:GLU98
|
4.7
|
22.3
|
0.4
|
|
OD2
|
E:ASP160
|
4.8
|
35.6
|
1.0
|
|
CG
|
E:ASP160
|
4.8
|
24.5
|
1.0
|
|
O
|
D:HOH458
|
4.8
|
42.3
|
1.0
|
|
OE1
|
D:GLU98
|
4.8
|
34.3
|
0.4
|
|
N
|
D:LEU100
|
5.0
|
25.2
|
1.0
|
|
Calcium binding site 8 out
of 20 in 5x2b
Go back to
Calcium Binding Sites List in 5x2b
Calcium binding site 8 out
of 20 in the Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 8 of Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Ca303
b:43.9
occ:1.00
|
O
|
D:VAL174
|
2.0
|
31.8
|
1.0
|
|
O
|
D:LYS169
|
2.4
|
21.1
|
1.0
|
|
O
|
F:HOH464
|
2.5
|
41.8
|
1.0
|
|
O
|
D:ASP171
|
2.6
|
48.1
|
1.0
|
|
O
|
F:HOH499
|
3.0
|
34.3
|
1.0
|
|
OE1
|
F:GLU167
|
3.1
|
47.6
|
1.0
|
|
C
|
D:VAL174
|
3.2
|
26.6
|
1.0
|
|
C
|
D:ASP171
|
3.6
|
38.0
|
1.0
|
|
C
|
D:LYS169
|
3.6
|
38.0
|
1.0
|
|
OE2
|
F:GLU167
|
3.7
|
47.3
|
1.0
|
|
CD
|
F:GLU167
|
3.7
|
48.0
|
1.0
|
|
CA
|
D:VAL174
|
4.0
|
21.6
|
1.0
|
|
C
|
D:ASN170
|
4.0
|
33.2
|
1.0
|
|
O
|
D:HOH508
|
4.0
|
31.5
|
1.0
|
|
N
|
D:VAL174
|
4.0
|
25.3
|
1.0
|
|
N
|
D:ASP171
|
4.1
|
25.2
|
1.0
|
|
CB
|
D:VAL174
|
4.1
|
23.8
|
1.0
|
|
CA
|
D:ASN170
|
4.2
|
28.6
|
1.0
|
|
N
|
D:LEU175
|
4.2
|
26.8
|
1.0
|
|
N
|
D:LYS172
|
4.3
|
30.9
|
1.0
|
|
O
|
D:LYS172
|
4.3
|
36.1
|
1.0
|
|
CA
|
D:LYS172
|
4.3
|
36.6
|
1.0
|
|
N
|
D:ASN170
|
4.4
|
32.5
|
1.0
|
|
O
|
F:HOH436
|
4.4
|
35.3
|
1.0
|
|
CA
|
D:LEU175
|
4.4
|
24.8
|
1.0
|
|
C
|
D:LYS172
|
4.4
|
31.7
|
1.0
|
|
O
|
D:ASN170
|
4.4
|
32.9
|
1.0
|
|
CA
|
D:ASP171
|
4.5
|
29.9
|
1.0
|
|
CA
|
D:LYS169
|
4.5
|
38.4
|
1.0
|
|
CG1
|
D:VAL174
|
4.7
|
25.8
|
1.0
|
|
CG
|
D:LYS169
|
4.8
|
33.4
|
1.0
|
|
O
|
D:HIS168
|
4.9
|
24.1
|
1.0
|
|
Calcium binding site 9 out
of 20 in 5x2b
Go back to
Calcium Binding Sites List in 5x2b
Calcium binding site 9 out
of 20 in the Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 9 of Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Ca304
b:58.4
occ:1.00
|
N
|
D:ARG89
|
2.2
|
37.9
|
1.0
|
|
OD1
|
D:ASP39
|
2.3
|
27.5
|
1.0
|
|
OD1
|
D:ASP38
|
2.6
|
41.0
|
1.0
|
|
OD2
|
D:ASP38
|
2.7
|
57.6
|
1.0
|
|
NE
|
D:ARG89
|
2.7
|
29.3
|
1.0
|
|
CG
|
D:ARG89
|
2.9
|
16.1
|
1.0
|
|
CG
|
D:ASP38
|
2.9
|
37.7
|
1.0
|
|
C
|
D:ARG88
|
3.0
|
44.2
|
1.0
|
|
CB
|
D:ARG89
|
3.0
|
30.1
|
1.0
|
|
CA
|
D:ARG88
|
3.1
|
47.3
|
1.0
|
|
O
|
D:LYS87
|
3.1
|
44.6
|
1.0
|
|
O
|
D:HOH411
|
3.1
|
56.8
|
1.0
|
|
CA
|
D:ARG89
|
3.1
|
37.2
|
1.0
|
|
CD
|
D:ARG89
|
3.2
|
33.6
|
1.0
|
|
CG
|
D:ASP39
|
3.5
|
14.9
|
1.0
|
|
CD
|
D:ARG36
|
3.6
|
23.9
|
1.0
|
|
NH1
|
D:ARG36
|
3.7
|
37.2
|
1.0
|
|
CZ
|
D:ARG89
|
3.8
|
39.8
|
1.0
|
|
CA
|
D:ASP39
|
3.8
|
22.9
|
1.0
|
|
C
|
D:LYS87
|
3.9
|
38.3
|
1.0
|
|
N
|
D:ARG88
|
3.9
|
43.3
|
1.0
|
|
N
|
D:ASP39
|
4.0
|
26.7
|
1.0
|
|
O
|
D:HOH430
|
4.1
|
52.7
|
1.0
|
|
O
|
D:ARG89
|
4.1
|
42.9
|
1.0
|
|
NH2
|
D:ARG89
|
4.1
|
49.7
|
1.0
|
|
C
|
D:ARG89
|
4.1
|
20.3
|
1.0
|
|
O
|
D:ARG88
|
4.1
|
31.3
|
1.0
|
|
CB
|
D:ARG36
|
4.1
|
26.6
|
1.0
|
|
CB
|
D:ASP39
|
4.2
|
20.0
|
1.0
|
|
CB
|
D:ARG88
|
4.2
|
37.8
|
1.0
|
|
CG
|
D:ARG88
|
4.3
|
32.4
|
1.0
|
|
CB
|
D:ASP38
|
4.3
|
36.8
|
1.0
|
|
OD2
|
D:ASP39
|
4.4
|
21.7
|
1.0
|
|
C
|
D:ASP38
|
4.5
|
31.8
|
1.0
|
|
CG
|
D:ARG36
|
4.5
|
22.8
|
1.0
|
|
NE
|
D:ARG36
|
4.6
|
35.0
|
1.0
|
|
CZ
|
D:ARG36
|
4.6
|
34.2
|
1.0
|
|
O
|
D:ASP38
|
4.8
|
40.4
|
1.0
|
|
NH1
|
D:ARG89
|
4.9
|
26.4
|
1.0
|
|
Calcium binding site 10 out
of 20 in 5x2b
Go back to
Calcium Binding Sites List in 5x2b
Calcium binding site 10 out
of 20 in the Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 10 of Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Ca302
b:43.5
occ:1.00
|
O
|
E:HOH446
|
2.3
|
34.4
|
1.0
|
|
O
|
E:GLU98
|
2.4
|
26.8
|
1.0
|
|
O
|
E:HOH423
|
2.5
|
46.1
|
1.0
|
|
O
|
E:HOH458
|
2.8
|
35.4
|
1.0
|
|
O
|
D:HOH486
|
2.9
|
38.6
|
1.0
|
|
O
|
D:HOH450
|
3.0
|
33.3
|
1.0
|
|
O
|
E:HOH442
|
3.2
|
41.6
|
1.0
|
|
C
|
E:GLU98
|
3.6
|
24.6
|
1.0
|
|
OD1
|
D:ASP160
|
3.8
|
37.8
|
1.0
|
|
OD2
|
E:ASP31
|
3.9
|
38.3
|
1.0
|
|
O
|
D:HOH542
|
4.0
|
29.7
|
1.0
|
|
CA
|
E:MET99
|
4.0
|
28.1
|
1.0
|
|
CG
|
D:ASP160
|
4.2
|
34.3
|
1.0
|
|
OD1
|
E:ASP31
|
4.3
|
32.6
|
1.0
|
|
N
|
E:MET99
|
4.3
|
27.3
|
1.0
|
|
OD2
|
D:ASP160
|
4.3
|
30.1
|
1.0
|
|
O
|
E:MET99
|
4.3
|
25.6
|
1.0
|
|
C
|
E:MET99
|
4.3
|
25.8
|
1.0
|
|
O
|
E:LEU100
|
4.4
|
33.7
|
1.0
|
|
CG
|
E:ASP31
|
4.5
|
26.5
|
1.0
|
|
NZ
|
E:LYS105
|
4.6
|
25.4
|
1.0
|
|
CA
|
E:GLU98
|
4.6
|
26.3
|
1.0
|
|
Reference:
S.Tanaka,
Y.Kakuta.
Crystal Structure of Mouse Sulfotransferase SULT7A1 Complexed with Pap To Be Published.
Page generated: Mon Jul 15 14:45:40 2024
|
