Calcium in PDB 5x2e: Crystal Structure of Calmodulin Like Domain of CSTAL3 (1-81AA)

The structure of Crystal Structure of Calmodulin Like Domain of CSTAL3 (1-81AA), PDB code: 5x2e was solved by C.H.Jo, K.Y.Hwang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.83 / 1.30
Space group	P 41
Cell size a, b, c (Å), α, β, γ (°)	47.827, 47.827, 42.537, 90.00, 90.00, 90.00
R / Rfree (%)	18 / 21.6

The binding sites of Calcium atom in the Crystal Structure of Calmodulin Like Domain of CSTAL3 (1-81AA) (pdb code 5x2e). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Calmodulin Like Domain of CSTAL3 (1-81AA), PDB code: 5x2e:

Calcium binding site 1 out of 1 in the Crystal Structure of Calmodulin Like Domain of CSTAL3 (1-81AA)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Calmodulin Like Domain of CSTAL3 (1-81AA) within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca101 b:17.6 occ:1.00 OD1 A:ASP12 2.2 18.6 1.0 O A:VAL18 2.3 18.0 1.0 O A:HOH262 2.3 23.6 1.0 OD1 A:ASP14 2.4 20.4 1.0 OE1 A:GLU23 2.5 18.8 1.0 OE2 A:GLU23 2.5 20.3 1.0 OG1 A:THR16 2.7 18.2 1.0 CD A:GLU23 2.9 17.9 1.0 CG A:ASP14 3.3 21.2 1.0 CG A:ASP12 3.5 18.0 1.0 C A:VAL18 3.5 17.5 1.0 OD2 A:ASP14 3.6 23.9 1.0 CB A:THR16 4.0 18.4 1.0 N A:THR16 4.2 17.4 1.0 CA A:ASP12 4.2 18.2 1.0 CB A:ASP12 4.3 18.9 1.0 OD2 A:ASP12 4.3 18.0 1.0 N A:ILE19 4.4 16.9 1.0 CA A:ILE19 4.4 17.2 1.0 N A:VAL18 4.4 16.7 1.0 CG A:GLU23 4.4 17.7 1.0 CG2 A:THR16 4.4 20.2 1.0 N A:SER20 4.4 17.8 1.0 CA A:VAL18 4.5 17.3 1.0 C A:ASP12 4.5 19.0 1.0 N A:ASP14 4.6 21.1 1.0 CA A:THR16 4.6 17.6 1.0 O A:HOH255 4.6 26.9 1.0 O A:HOH269 4.6 33.0 1.0 CB A:ASP14 4.6 22.6 1.0 O A:HOH251 4.8 35.9 1.0 O A:HOH220 4.8 33.1 1.0 N A:LYS13 4.8 20.6 1.0 N A:ASN17 4.8 16.4 1.0 N A:GLY15 4.9 19.6 1.0 C A:ILE19 4.9 17.5 1.0 CB A:VAL18 4.9 18.7 1.0 CA A:ASP14 5.0 21.9 1.0

C.H.Jo, J.Son, S.Kim, T.Oda, J.Kim, M.R.Lee, M.Sato, H.T.Kim, S.Unzai, S.Y.Park, K.Y.Hwang. Structural Insights Into A 20.8-kDa Tegumental-Allergen-Like (Tal) Protein From Clonorchis Sinensis Sci Rep V. 7 1764 2017.
ISSN: ESSN 2045-2322
PubMed: 28496122
DOI: 10.1038/S41598-017-02044-0