Calcium in PDB 5xuw: Crystal Structure of Lysozyme From Equus Asinus

All present enzymatic activity of Crystal Structure of Lysozyme From Equus Asinus:
3.2.1.17;

The structure of Crystal Structure of Lysozyme From Equus Asinus, PDB code: 5xuw was solved by L.Jiang, J.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.83 / 1.76
Space group	P 32
Cell size a, b, c (Å), α, β, γ (°)	57.543, 57.543, 73.359, 90.00, 90.00, 120.00
R / Rfree (%)	19.3 / 22.1

The binding sites of Calcium atom in the Crystal Structure of Lysozyme From Equus Asinus (pdb code 5xuw). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of Lysozyme From Equus Asinus, PDB code: 5xuw:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Crystal Structure of Lysozyme From Equus Asinus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Lysozyme From Equus Asinus within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca201 b:17.6 occ:1.00 O A:LYS82 2.3 18.9 1.0 OD1 A:ASP85 2.4 19.8 1.0 O A:HOH310 2.4 25.0 1.0 O A:ASN87 2.4 15.5 1.0 O A:HOH334 2.4 17.9 1.0 OD1 A:ASP90 2.4 18.2 1.0 OD1 A:ASP91 2.5 16.4 1.0 CG A:ASP85 3.4 19.5 1.0 CG A:ASP90 3.4 18.0 1.0 C A:LYS82 3.5 19.4 1.0 C A:ASN87 3.6 16.2 1.0 CG A:ASP91 3.6 16.6 1.0 OD2 A:ASP90 3.7 19.0 1.0 OD2 A:ASP85 3.8 22.0 1.0 CA A:LEU83 4.0 18.4 1.0 O A:HOH309 4.1 20.9 1.0 CA A:ILE88 4.2 15.6 1.0 OD2 A:ASP91 4.2 17.0 1.0 N A:LEU83 4.2 18.6 1.0 N A:ILE88 4.3 15.6 1.0 N A:ASP91 4.4 15.6 1.0 C A:LEU83 4.5 18.2 1.0 O A:ASP85 4.5 16.1 1.0 N A:ASP85 4.5 16.5 1.0 CA A:LYS82 4.6 20.4 1.0 CA A:ASN87 4.7 16.8 1.0 CB A:ASP85 4.7 18.1 1.0 N A:ASN87 4.7 16.6 1.0 C A:ILE88 4.8 15.9 1.0 C A:ASP85 4.8 16.5 1.0 CB A:ASP90 4.8 17.4 1.0 N A:LEU84 4.8 17.5 1.0 CB A:ASP91 4.8 15.5 1.0 N A:ASP90 4.9 16.7 1.0 CD2 A:LEU83 4.9 19.7 1.0 CA A:ASP85 4.9 17.0 1.0

Calcium binding site 2 out of 2 in the Crystal Structure of Lysozyme From Equus Asinus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of Lysozyme From Equus Asinus within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca201 b:17.4 occ:1.00 OD2 B:ASP85 2.3 20.1 1.0 O B:LYS82 2.4 20.3 1.0 O B:ASN87 2.4 16.1 1.0 O B:HOH332 2.4 16.5 1.0 O B:HOH311 2.4 21.4 1.0 OD1 B:ASP90 2.4 19.3 1.0 OD1 B:ASP91 2.5 16.5 1.0 CG B:ASP90 3.4 19.0 1.0 CG B:ASP85 3.4 20.1 1.0 C B:LYS82 3.5 20.1 1.0 C B:ASN87 3.6 16.3 1.0 CG B:ASP91 3.6 17.0 1.0 OD2 B:ASP90 3.7 20.6 1.0 OD1 B:ASP85 3.8 22.4 1.0 CA B:LEU83 4.0 18.1 1.0 O B:HOH309 4.1 19.7 1.0 CA B:ILE88 4.1 15.6 1.0 OD2 B:ASP91 4.2 17.5 1.0 N B:LEU83 4.2 18.8 1.0 N B:ILE88 4.3 15.6 1.0 N B:ASP91 4.4 15.6 1.0 O B:ASP85 4.5 16.5 1.0 C B:LEU83 4.5 18.0 1.0 N B:ASP85 4.6 17.0 1.0 CA B:LYS82 4.6 21.1 1.0 CA B:ASN87 4.7 16.5 1.0 CB B:ASP85 4.7 18.9 1.0 N B:ASN87 4.7 16.7 1.0 C B:ILE88 4.8 16.2 1.0 C B:ASP85 4.8 17.0 1.0 CB B:ASP90 4.8 18.0 1.0 CB B:ASP91 4.8 15.7 1.0 N B:LEU84 4.8 17.5 1.0 CD2 B:LEU83 4.9 19.3 1.0 N B:ASP90 4.9 16.3 1.0 CA B:ASP85 4.9 17.9 1.0

L.Jiang, J.Liu. Crystal Structure of Lysozyme From Equus Asinus To Be Published.