Calcium in PDB 6a98: Crystal Structure of A Cyclase From Fischerella Sp. Tau
Protein crystallography data
The structure of Crystal Structure of A Cyclase From Fischerella Sp. Tau, PDB code: 6a98
was solved by
X.Y.Hu,
W.D.Liu,
C.C.Chen,
R.T.Guo,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
24.96 /
1.82
|
|
Space group
|
P 1
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
39.442,
53.340,
95.162,
104.54,
91.39,
92.91
|
|
R / Rfree (%)
|
16.5 /
20.1
|
Calcium Binding Sites:
The binding sites of Calcium atom in the Crystal Structure of A Cyclase From Fischerella Sp. Tau
(pdb code 6a98). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 8 binding sites of Calcium where determined in the
Crystal Structure of A Cyclase From Fischerella Sp. Tau, PDB code: 6a98:
Jump to Calcium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Calcium binding site 1 out
of 8 in 6a98
Go back to
Calcium Binding Sites List in 6a98
Calcium binding site 1 out
of 8 in the Crystal Structure of A Cyclase From Fischerella Sp. Tau
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Crystal Structure of A Cyclase From Fischerella Sp. Tau within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca302
b:24.2
occ:1.00
|
OD1
|
A:ASN138
|
2.3
|
21.0
|
1.0
|
|
O
|
A:GLY150
|
2.3
|
22.9
|
1.0
|
|
O
|
A:HOH467
|
2.4
|
23.3
|
1.0
|
|
O
|
A:LEU148
|
2.4
|
25.0
|
1.0
|
|
O
|
A:SER139
|
2.4
|
27.0
|
1.0
|
|
OE2
|
A:GLU176
|
2.4
|
30.3
|
1.0
|
|
OE1
|
A:GLU176
|
2.5
|
27.4
|
1.0
|
|
CD
|
A:GLU176
|
2.8
|
27.3
|
1.0
|
|
CG
|
A:ASN138
|
3.4
|
20.4
|
1.0
|
|
C
|
A:GLY150
|
3.5
|
22.1
|
1.0
|
|
C
|
A:SER139
|
3.6
|
26.9
|
1.0
|
|
C
|
A:LEU148
|
3.6
|
30.4
|
1.0
|
|
N
|
A:GLY150
|
3.8
|
23.5
|
1.0
|
|
ND2
|
A:ASN138
|
4.0
|
20.0
|
1.0
|
|
C
|
A:ASP149
|
4.1
|
25.1
|
1.0
|
|
C
|
A:ASN138
|
4.2
|
24.3
|
1.0
|
|
CA
|
A:ASP149
|
4.2
|
29.5
|
1.0
|
|
N
|
A:SER139
|
4.2
|
22.9
|
1.0
|
|
CA
|
A:GLY150
|
4.3
|
23.0
|
1.0
|
|
CA
|
A:GLY140
|
4.3
|
30.7
|
1.0
|
|
O
|
A:ASN138
|
4.3
|
25.5
|
1.0
|
|
N
|
A:ASP149
|
4.3
|
29.1
|
1.0
|
|
CG
|
A:GLU176
|
4.3
|
28.7
|
1.0
|
|
N
|
A:GLY140
|
4.4
|
27.1
|
1.0
|
|
N
|
A:PHE151
|
4.4
|
20.1
|
1.0
|
|
CA
|
A:PHE151
|
4.5
|
20.1
|
1.0
|
|
CA
|
A:SER139
|
4.5
|
24.6
|
1.0
|
|
CB
|
A:PHE151
|
4.5
|
19.6
|
1.0
|
|
CB
|
A:ASN138
|
4.6
|
19.4
|
1.0
|
|
CA
|
A:ASN138
|
4.7
|
22.1
|
1.0
|
|
CA
|
A:LEU148
|
4.7
|
30.7
|
1.0
|
|
CB
|
A:LEU148
|
4.7
|
32.2
|
1.0
|
|
OG
|
A:SER139
|
4.7
|
28.4
|
1.0
|
|
O
|
A:ASP149
|
4.8
|
22.6
|
1.0
|
|
CD2
|
A:PHE211
|
4.8
|
25.1
|
1.0
|
|
CD1
|
A:PHE151
|
4.8
|
18.2
|
1.0
|
|
O
|
A:HOH428
|
4.9
|
41.2
|
1.0
|
|
Calcium binding site 2 out
of 8 in 6a98
Go back to
Calcium Binding Sites List in 6a98
Calcium binding site 2 out
of 8 in the Crystal Structure of A Cyclase From Fischerella Sp. Tau
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Crystal Structure of A Cyclase From Fischerella Sp. Tau within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca303
b:25.6
occ:1.00
|
O
|
A:GLY38
|
2.3
|
27.6
|
1.0
|
|
O
|
A:ASN99
|
2.3
|
22.3
|
1.0
|
|
OE2
|
A:GLU40
|
2.3
|
28.0
|
1.0
|
|
O
|
A:GLU96
|
2.3
|
24.5
|
1.0
|
|
OD1
|
A:ASP217
|
2.4
|
22.0
|
1.0
|
|
OE1
|
A:GLU96
|
2.4
|
27.6
|
1.0
|
|
OD2
|
A:ASP217
|
2.9
|
25.2
|
1.0
|
|
CG
|
A:ASP217
|
3.0
|
26.4
|
1.0
|
|
C
|
A:GLY38
|
3.4
|
28.4
|
1.0
|
|
C
|
A:GLU96
|
3.4
|
27.7
|
1.0
|
|
CD
|
A:GLU40
|
3.5
|
29.1
|
1.0
|
|
C
|
A:ASN99
|
3.5
|
22.3
|
1.0
|
|
CD
|
A:GLU96
|
3.6
|
31.7
|
1.0
|
|
CA
|
A:GLY38
|
3.8
|
27.4
|
1.0
|
|
CB
|
A:GLU96
|
3.9
|
28.8
|
1.0
|
|
N
|
A:ASN99
|
3.9
|
26.7
|
1.0
|
|
CG
|
A:GLU40
|
4.0
|
28.8
|
1.0
|
|
CA
|
A:GLU96
|
4.1
|
28.2
|
1.0
|
|
CA
|
A:ASN99
|
4.2
|
23.9
|
1.0
|
|
CG
|
A:GLU96
|
4.3
|
29.9
|
1.0
|
|
N
|
A:GLY97
|
4.3
|
27.6
|
1.0
|
|
CB
|
A:ASP217
|
4.4
|
22.6
|
1.0
|
|
N
|
A:GLU96
|
4.5
|
26.7
|
1.0
|
|
CA
|
A:GLY97
|
4.5
|
25.9
|
1.0
|
|
OE2
|
A:GLU96
|
4.5
|
32.8
|
1.0
|
|
OE1
|
A:GLU40
|
4.5
|
30.8
|
1.0
|
|
N
|
A:VAL100
|
4.5
|
22.4
|
1.0
|
|
N
|
A:PHE39
|
4.6
|
25.3
|
1.0
|
|
C
|
A:GLY97
|
4.6
|
26.4
|
1.0
|
|
N
|
A:ARG98
|
4.6
|
25.9
|
1.0
|
|
CB
|
A:ASN99
|
4.7
|
24.8
|
1.0
|
|
CA
|
A:VAL100
|
4.7
|
21.8
|
1.0
|
|
CB
|
A:ALA94
|
4.8
|
29.0
|
1.0
|
|
N
|
A:ASN218
|
4.8
|
21.2
|
1.0
|
|
C
|
A:PHE39
|
4.8
|
28.2
|
1.0
|
|
N
|
A:GLU40
|
4.9
|
28.0
|
1.0
|
|
C
|
A:ARG98
|
5.0
|
25.6
|
1.0
|
|
Calcium binding site 3 out
of 8 in 6a98
Go back to
Calcium Binding Sites List in 6a98
Calcium binding site 3 out
of 8 in the Crystal Structure of A Cyclase From Fischerella Sp. Tau
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Crystal Structure of A Cyclase From Fischerella Sp. Tau within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca402
b:26.1
occ:1.00
|
O
|
B:GLY38
|
2.3
|
29.8
|
1.0
|
|
O
|
B:ASN99
|
2.3
|
29.0
|
1.0
|
|
OE2
|
B:GLU40
|
2.4
|
29.5
|
1.0
|
|
O
|
B:GLU96
|
2.4
|
24.0
|
1.0
|
|
OE1
|
B:GLU96
|
2.4
|
29.2
|
1.0
|
|
OD1
|
B:ASP217
|
2.4
|
25.5
|
1.0
|
|
OD2
|
B:ASP217
|
2.9
|
26.4
|
1.0
|
|
CG
|
B:ASP217
|
3.0
|
24.5
|
1.0
|
|
C
|
B:GLY38
|
3.4
|
26.5
|
1.0
|
|
C
|
B:GLU96
|
3.4
|
24.9
|
1.0
|
|
C
|
B:ASN99
|
3.5
|
29.2
|
1.0
|
|
CD
|
B:GLU40
|
3.5
|
29.7
|
1.0
|
|
CD
|
B:GLU96
|
3.5
|
30.7
|
1.0
|
|
CA
|
B:GLY38
|
3.8
|
25.2
|
1.0
|
|
N
|
B:ASN99
|
3.9
|
30.1
|
1.0
|
|
CB
|
B:GLU96
|
3.9
|
26.3
|
1.0
|
|
CG
|
B:GLU40
|
4.0
|
30.8
|
1.0
|
|
CA
|
B:GLU96
|
4.1
|
23.8
|
1.0
|
|
CA
|
B:ASN99
|
4.2
|
30.1
|
1.0
|
|
CG
|
B:GLU96
|
4.2
|
27.4
|
1.0
|
|
N
|
B:GLY97
|
4.3
|
26.1
|
1.0
|
|
OE2
|
B:GLU96
|
4.4
|
30.4
|
1.0
|
|
N
|
B:GLU96
|
4.4
|
23.4
|
1.0
|
|
CB
|
B:ASP217
|
4.4
|
22.6
|
1.0
|
|
CA
|
B:GLY97
|
4.5
|
25.2
|
1.0
|
|
N
|
B:VAL100
|
4.5
|
27.4
|
1.0
|
|
OE1
|
B:GLU40
|
4.5
|
29.5
|
1.0
|
|
N
|
B:PHE39
|
4.6
|
27.2
|
1.0
|
|
C
|
B:GLY97
|
4.6
|
24.9
|
1.0
|
|
N
|
B:ARG98
|
4.6
|
28.2
|
1.0
|
|
CB
|
B:ASN99
|
4.7
|
29.8
|
1.0
|
|
CB
|
B:ALA94
|
4.7
|
28.8
|
1.0
|
|
CA
|
B:VAL100
|
4.8
|
26.9
|
1.0
|
|
C
|
B:PHE39
|
4.8
|
28.7
|
1.0
|
|
N
|
B:ASN218
|
4.8
|
25.1
|
1.0
|
|
N
|
B:GLU40
|
4.8
|
29.7
|
1.0
|
|
C
|
B:ARG98
|
4.9
|
31.7
|
1.0
|
|
Calcium binding site 4 out
of 8 in 6a98
Go back to
Calcium Binding Sites List in 6a98
Calcium binding site 4 out
of 8 in the Crystal Structure of A Cyclase From Fischerella Sp. Tau
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of Crystal Structure of A Cyclase From Fischerella Sp. Tau within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca403
b:24.9
occ:1.00
|
O
|
B:GLY150
|
2.3
|
24.5
|
1.0
|
|
OD1
|
B:ASN138
|
2.3
|
22.1
|
1.0
|
|
O
|
B:HOH582
|
2.4
|
27.6
|
1.0
|
|
O
|
B:SER139
|
2.4
|
24.5
|
1.0
|
|
O
|
B:LEU148
|
2.4
|
26.9
|
1.0
|
|
OE1
|
B:GLU176
|
2.5
|
26.5
|
1.0
|
|
OE2
|
B:GLU176
|
2.5
|
27.9
|
1.0
|
|
CD
|
B:GLU176
|
2.8
|
26.1
|
1.0
|
|
C
|
B:GLY150
|
3.4
|
24.6
|
1.0
|
|
CG
|
B:ASN138
|
3.5
|
22.4
|
1.0
|
|
C
|
B:LEU148
|
3.6
|
31.4
|
1.0
|
|
C
|
B:SER139
|
3.6
|
21.8
|
1.0
|
|
N
|
B:GLY150
|
3.7
|
23.6
|
1.0
|
|
C
|
B:ASP149
|
4.0
|
30.4
|
1.0
|
|
N
|
B:SER139
|
4.1
|
21.9
|
1.0
|
|
CA
|
B:GLY150
|
4.2
|
25.9
|
1.0
|
|
CA
|
B:ASP149
|
4.2
|
31.1
|
1.0
|
|
ND2
|
B:ASN138
|
4.2
|
19.2
|
1.0
|
|
C
|
B:ASN138
|
4.2
|
23.3
|
1.0
|
|
N
|
B:ASP149
|
4.3
|
29.7
|
1.0
|
|
CG
|
B:GLU176
|
4.3
|
27.8
|
1.0
|
|
N
|
B:PHE151
|
4.4
|
25.4
|
1.0
|
|
O
|
B:ASN138
|
4.4
|
22.8
|
1.0
|
|
N
|
B:GLY140
|
4.4
|
23.9
|
1.0
|
|
CA
|
B:SER139
|
4.5
|
22.5
|
1.0
|
|
CA
|
B:GLY140
|
4.5
|
25.3
|
1.0
|
|
CA
|
B:PHE151
|
4.5
|
23.0
|
1.0
|
|
CB
|
B:LEU148
|
4.6
|
34.2
|
1.0
|
|
CB
|
B:PHE151
|
4.6
|
22.6
|
1.0
|
|
OG
|
B:SER139
|
4.6
|
25.2
|
1.0
|
|
CA
|
B:LEU148
|
4.7
|
31.7
|
1.0
|
|
CB
|
B:ASN138
|
4.7
|
22.1
|
1.0
|
|
CA
|
B:ASN138
|
4.7
|
21.4
|
1.0
|
|
O
|
B:ASP149
|
4.7
|
24.7
|
1.0
|
|
CD2
|
B:PHE211
|
4.8
|
28.1
|
1.0
|
|
CD1
|
B:PHE151
|
4.9
|
23.5
|
1.0
|
|
CB
|
B:PHE211
|
4.9
|
28.4
|
1.0
|
|
CB
|
B:GLU176
|
5.0
|
25.7
|
1.0
|
|
Calcium binding site 5 out
of 8 in 6a98
Go back to
Calcium Binding Sites List in 6a98
Calcium binding site 5 out
of 8 in the Crystal Structure of A Cyclase From Fischerella Sp. Tau
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 5 of Crystal Structure of A Cyclase From Fischerella Sp. Tau within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca301
b:25.4
occ:1.00
|
O
|
C:GLY150
|
2.3
|
23.4
|
1.0
|
|
OD1
|
C:ASN138
|
2.3
|
20.7
|
1.0
|
|
O
|
C:HOH497
|
2.4
|
24.6
|
1.0
|
|
O
|
C:SER139
|
2.4
|
22.7
|
1.0
|
|
O
|
C:LEU148
|
2.4
|
25.3
|
1.0
|
|
OE2
|
C:GLU176
|
2.5
|
30.4
|
1.0
|
|
OE1
|
C:GLU176
|
2.5
|
26.6
|
1.0
|
|
CD
|
C:GLU176
|
2.8
|
24.7
|
1.0
|
|
C
|
C:GLY150
|
3.4
|
23.0
|
1.0
|
|
CG
|
C:ASN138
|
3.5
|
22.7
|
1.0
|
|
C
|
C:SER139
|
3.6
|
24.4
|
1.0
|
|
C
|
C:LEU148
|
3.6
|
29.4
|
1.0
|
|
N
|
C:GLY150
|
3.7
|
25.1
|
1.0
|
|
C
|
C:ASP149
|
4.0
|
26.8
|
1.0
|
|
ND2
|
C:ASN138
|
4.1
|
19.6
|
1.0
|
|
CA
|
C:GLY150
|
4.2
|
22.2
|
1.0
|
|
C
|
C:ASN138
|
4.2
|
22.9
|
1.0
|
|
CA
|
C:ASP149
|
4.2
|
29.2
|
1.0
|
|
N
|
C:SER139
|
4.2
|
23.3
|
1.0
|
|
N
|
C:ASP149
|
4.3
|
28.4
|
1.0
|
|
CG
|
C:GLU176
|
4.3
|
26.6
|
1.0
|
|
O
|
C:ASN138
|
4.3
|
24.7
|
1.0
|
|
CA
|
C:GLY140
|
4.4
|
24.8
|
1.0
|
|
N
|
C:GLY140
|
4.4
|
22.3
|
1.0
|
|
N
|
C:PHE151
|
4.5
|
21.4
|
1.0
|
|
CA
|
C:SER139
|
4.5
|
22.8
|
1.0
|
|
CA
|
C:PHE151
|
4.6
|
21.5
|
1.0
|
|
OG
|
C:SER139
|
4.6
|
25.7
|
1.0
|
|
CB
|
C:LEU148
|
4.6
|
28.8
|
1.0
|
|
CB
|
C:ASN138
|
4.7
|
22.1
|
1.0
|
|
CA
|
C:ASN138
|
4.7
|
22.2
|
1.0
|
|
CA
|
C:LEU148
|
4.7
|
29.6
|
1.0
|
|
CB
|
C:PHE151
|
4.7
|
21.7
|
1.0
|
|
O
|
C:ASP149
|
4.7
|
22.5
|
1.0
|
|
CD2
|
C:PHE211
|
4.7
|
26.7
|
1.0
|
|
CD1
|
C:PHE151
|
4.8
|
20.4
|
1.0
|
|
CB
|
C:PHE211
|
4.9
|
25.8
|
1.0
|
|
Calcium binding site 6 out
of 8 in 6a98
Go back to
Calcium Binding Sites List in 6a98
Calcium binding site 6 out
of 8 in the Crystal Structure of A Cyclase From Fischerella Sp. Tau
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 6 of Crystal Structure of A Cyclase From Fischerella Sp. Tau within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca302
b:26.4
occ:1.00
|
O
|
C:GLY38
|
2.3
|
28.6
|
1.0
|
|
O
|
C:ASN99
|
2.3
|
28.9
|
1.0
|
|
OE2
|
C:GLU40
|
2.4
|
27.0
|
1.0
|
|
O
|
C:GLU96
|
2.4
|
25.4
|
1.0
|
|
OD1
|
C:ASP217
|
2.4
|
25.4
|
1.0
|
|
OE1
|
C:GLU96
|
2.4
|
27.7
|
1.0
|
|
OD2
|
C:ASP217
|
2.9
|
26.8
|
1.0
|
|
CG
|
C:ASP217
|
2.9
|
25.1
|
1.0
|
|
C
|
C:GLY38
|
3.4
|
25.1
|
1.0
|
|
C
|
C:GLU96
|
3.4
|
25.2
|
1.0
|
|
C
|
C:ASN99
|
3.4
|
26.0
|
1.0
|
|
CD
|
C:GLU40
|
3.5
|
31.0
|
1.0
|
|
CD
|
C:GLU96
|
3.6
|
30.3
|
1.0
|
|
CA
|
C:GLY38
|
3.8
|
24.2
|
1.0
|
|
N
|
C:ASN99
|
3.9
|
27.9
|
1.0
|
|
CB
|
C:GLU96
|
4.0
|
28.4
|
1.0
|
|
CG
|
C:GLU40
|
4.1
|
29.4
|
1.0
|
|
CA
|
C:ASN99
|
4.2
|
27.3
|
1.0
|
|
CA
|
C:GLU96
|
4.2
|
26.5
|
1.0
|
|
N
|
C:GLY97
|
4.3
|
28.3
|
1.0
|
|
CG
|
C:GLU96
|
4.4
|
28.9
|
1.0
|
|
CB
|
C:ASP217
|
4.4
|
23.7
|
1.0
|
|
N
|
C:GLU96
|
4.4
|
26.2
|
1.0
|
|
OE2
|
C:GLU96
|
4.4
|
32.9
|
1.0
|
|
N
|
C:VAL100
|
4.5
|
27.4
|
1.0
|
|
CA
|
C:GLY97
|
4.5
|
24.6
|
1.0
|
|
CB
|
C:ASN99
|
4.5
|
26.9
|
1.0
|
|
OE1
|
C:GLU40
|
4.5
|
31.1
|
1.0
|
|
N
|
C:PHE39
|
4.6
|
23.2
|
1.0
|
|
N
|
C:ARG98
|
4.6
|
27.0
|
1.0
|
|
C
|
C:GLY97
|
4.7
|
24.9
|
1.0
|
|
CB
|
C:ALA94
|
4.7
|
23.9
|
1.0
|
|
CA
|
C:VAL100
|
4.8
|
26.4
|
1.0
|
|
C
|
C:PHE39
|
4.9
|
26.9
|
1.0
|
|
N
|
C:ASN218
|
4.9
|
22.4
|
1.0
|
|
N
|
C:GLU40
|
4.9
|
27.1
|
1.0
|
|
C
|
C:ARG98
|
5.0
|
30.4
|
1.0
|
|
Calcium binding site 7 out
of 8 in 6a98
Go back to
Calcium Binding Sites List in 6a98
Calcium binding site 7 out
of 8 in the Crystal Structure of A Cyclase From Fischerella Sp. Tau
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 7 of Crystal Structure of A Cyclase From Fischerella Sp. Tau within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Ca301
b:33.5
occ:1.00
|
O
|
D:GLY150
|
2.3
|
28.9
|
1.0
|
|
OD1
|
D:ASN138
|
2.3
|
28.2
|
1.0
|
|
O
|
D:HOH435
|
2.4
|
34.9
|
1.0
|
|
OE2
|
D:GLU176
|
2.4
|
42.7
|
1.0
|
|
O
|
D:LEU148
|
2.4
|
36.9
|
1.0
|
|
O
|
D:SER139
|
2.4
|
31.7
|
1.0
|
|
OE1
|
D:GLU176
|
2.5
|
43.1
|
1.0
|
|
CD
|
D:GLU176
|
2.7
|
41.5
|
1.0
|
|
C
|
D:GLY150
|
3.4
|
29.4
|
1.0
|
|
CG
|
D:ASN138
|
3.4
|
29.0
|
1.0
|
|
C
|
D:SER139
|
3.5
|
37.0
|
1.0
|
|
C
|
D:LEU148
|
3.6
|
44.1
|
1.0
|
|
N
|
D:GLY150
|
3.7
|
31.2
|
1.0
|
|
ND2
|
D:ASN138
|
4.1
|
28.9
|
1.0
|
|
C
|
D:ASP149
|
4.1
|
30.1
|
1.0
|
|
C
|
D:ASN138
|
4.1
|
28.6
|
1.0
|
|
CA
|
D:GLY150
|
4.2
|
26.4
|
1.0
|
|
N
|
D:SER139
|
4.2
|
31.6
|
1.0
|
|
CG
|
D:GLU176
|
4.2
|
41.0
|
1.0
|
|
CA
|
D:ASP149
|
4.3
|
41.0
|
1.0
|
|
N
|
D:GLY140
|
4.4
|
38.2
|
1.0
|
|
O
|
D:ASN138
|
4.4
|
32.1
|
1.0
|
|
N
|
D:PHE151
|
4.4
|
29.9
|
1.0
|
|
CA
|
D:GLY140
|
4.4
|
46.0
|
1.0
|
|
N
|
D:ASP149
|
4.4
|
42.0
|
1.0
|
|
CA
|
D:SER139
|
4.5
|
34.8
|
1.0
|
|
CA
|
D:PHE151
|
4.5
|
28.5
|
1.0
|
|
CB
|
D:PHE151
|
4.5
|
25.6
|
1.0
|
|
OG
|
D:SER139
|
4.6
|
31.9
|
1.0
|
|
CB
|
D:ASN138
|
4.6
|
26.9
|
1.0
|
|
CA
|
D:ASN138
|
4.7
|
28.9
|
1.0
|
|
CA
|
D:LEU148
|
4.7
|
43.5
|
1.0
|
|
CB
|
D:LEU148
|
4.7
|
46.7
|
1.0
|
|
O
|
D:ASP149
|
4.9
|
29.6
|
1.0
|
|
CD1
|
D:PHE151
|
4.9
|
29.4
|
1.0
|
|
CD2
|
D:PHE211
|
4.9
|
35.9
|
1.0
|
|
O
|
D:PHE211
|
5.0
|
36.1
|
1.0
|
|
CB
|
D:GLU176
|
5.0
|
41.2
|
1.0
|
|
CB
|
D:PHE211
|
5.0
|
36.9
|
1.0
|
|
Calcium binding site 8 out
of 8 in 6a98
Go back to
Calcium Binding Sites List in 6a98
Calcium binding site 8 out
of 8 in the Crystal Structure of A Cyclase From Fischerella Sp. Tau
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 8 of Crystal Structure of A Cyclase From Fischerella Sp. Tau within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Ca302
b:37.1
occ:1.00
|
O
|
D:GLY38
|
2.3
|
39.0
|
1.0
|
|
O
|
D:GLU96
|
2.3
|
36.2
|
1.0
|
|
O
|
D:ASN99
|
2.3
|
35.4
|
1.0
|
|
OE2
|
D:GLU40
|
2.4
|
38.8
|
1.0
|
|
OD1
|
D:ASP217
|
2.4
|
28.5
|
1.0
|
|
OE1
|
D:GLU96
|
2.5
|
38.3
|
1.0
|
|
OD2
|
D:ASP217
|
2.9
|
31.4
|
1.0
|
|
CG
|
D:ASP217
|
3.0
|
31.7
|
1.0
|
|
C
|
D:GLU96
|
3.3
|
43.7
|
1.0
|
|
C
|
D:GLY38
|
3.3
|
37.5
|
1.0
|
|
CD
|
D:GLU40
|
3.5
|
47.8
|
1.0
|
|
C
|
D:ASN99
|
3.5
|
36.2
|
1.0
|
|
CD
|
D:GLU96
|
3.6
|
38.7
|
1.0
|
|
CA
|
D:GLY38
|
3.8
|
35.7
|
1.0
|
|
CB
|
D:GLU96
|
3.8
|
42.3
|
1.0
|
|
N
|
D:ASN99
|
4.0
|
37.1
|
1.0
|
|
CG
|
D:GLU40
|
4.0
|
44.2
|
1.0
|
|
CA
|
D:GLU96
|
4.1
|
41.2
|
1.0
|
|
N
|
D:GLY97
|
4.2
|
41.1
|
1.0
|
|
CA
|
D:ASN99
|
4.3
|
37.4
|
1.0
|
|
CG
|
D:GLU96
|
4.3
|
41.2
|
1.0
|
|
CA
|
D:GLY97
|
4.4
|
40.3
|
1.0
|
|
N
|
D:GLU96
|
4.4
|
36.4
|
1.0
|
|
CB
|
D:ASP217
|
4.5
|
31.1
|
1.0
|
|
OE2
|
D:GLU96
|
4.5
|
43.4
|
1.0
|
|
N
|
D:PHE39
|
4.5
|
36.7
|
1.0
|
|
OE1
|
D:GLU40
|
4.6
|
49.9
|
1.0
|
|
N
|
D:ARG98
|
4.6
|
44.3
|
1.0
|
|
N
|
D:VAL100
|
4.6
|
33.7
|
1.0
|
|
CB
|
D:ASN99
|
4.6
|
41.0
|
1.0
|
|
C
|
D:GLY97
|
4.7
|
39.4
|
1.0
|
|
CB
|
D:ALA94
|
4.7
|
37.7
|
1.0
|
|
N
|
D:ASN218
|
4.8
|
29.3
|
1.0
|
|
CA
|
D:VAL100
|
4.9
|
33.9
|
1.0
|
|
C
|
D:PHE39
|
4.9
|
43.7
|
1.0
|
|
N
|
D:GLU40
|
5.0
|
41.3
|
1.0
|
|
Reference:
C.C.Chen,
X.Hu,
X.Tang,
Y.Yang,
T.P.Ko,
J.Gao,
Y.Zheng,
J.W.Huang,
Z.Yu,
L.Li,
S.Han,
N.Cai,
Y.Zhang,
W.Liu,
R.T.Guo.
The Crystal Structure of A Class of Cyclases That Catalyze the Cope Rearrangement Angew. Chem. Int. Ed. Engl. V. 57 15060 2018.
ISSN: ESSN 1521-3773
PubMed: 30222239
DOI: 10.1002/ANIE.201808231
Page generated: Mon Jul 15 16:02:39 2024
|
