Calcium in PDB 6amz: Crystal Structure of A Domain Swapped 2,3,4,5-Tetrahydropyridine-2,6- Dicarboxylate N-Succinyltransferase From Acinetobacter Baumannii

Enzymatic activity of Crystal Structure of A Domain Swapped 2,3,4,5-Tetrahydropyridine-2,6- Dicarboxylate N-Succinyltransferase From Acinetobacter Baumannii

All present enzymatic activity of Crystal Structure of A Domain Swapped 2,3,4,5-Tetrahydropyridine-2,6- Dicarboxylate N-Succinyltransferase From Acinetobacter Baumannii:
2.3.1.117;

Protein crystallography data

The structure of Crystal Structure of A Domain Swapped 2,3,4,5-Tetrahydropyridine-2,6- Dicarboxylate N-Succinyltransferase From Acinetobacter Baumannii, PDB code: 6amz was solved by T.E.Edwards, Seattle Structural Genomics Center For Infectious Disease(Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	38.33 / 2.05
*Space group*	H 3 2
*Cell size a, b, c (Å), α, β, γ (°)*	92.250, 92.250, 218.440, 90.00, 90.00, 120.00
*R / R_free (%)*	15.5 / 18.2

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of A Domain Swapped 2,3,4,5-Tetrahydropyridine-2,6- Dicarboxylate N-Succinyltransferase From Acinetobacter Baumannii (pdb code 6amz). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of A Domain Swapped 2,3,4,5-Tetrahydropyridine-2,6- Dicarboxylate N-Succinyltransferase From Acinetobacter Baumannii, PDB code: 6amz:

Calcium binding site 1 out of 1 in 6amz

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Calcium Binding Sites List in 6amz

Calcium binding site 1 out of 1 in the Crystal Structure of A Domain Swapped 2,3,4,5-Tetrahydropyridine-2,6- Dicarboxylate N-Succinyltransferase From Acinetobacter Baumannii

Mono view

Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of A Domain Swapped 2,3,4,5-Tetrahydropyridine-2,6- Dicarboxylate N-Succinyltransferase From Acinetobacter Baumannii within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Ca302 b:71.5 occ:0.16	O	A:HOH410	2.4	54.9	0.3
	SG	A:CYS78	3.1	53.7	0.7
	OG	A:SER77	4.2	40.5	0.7
	CB	A:CYS78	4.5	46.5	0.3
	CB	A:CYS78	4.6	46.7	0.7
	N	A:CYS78	4.7	36.1	1.0
	CA	A:CYS78	4.8	41.4	0.3
	CA	A:CYS78	4.8	40.5	0.7

Reference:

T.E.Edwards, P.S.Horanyi, D.D.Lorimer, Seattle Structural Genomics Center For Infectious Disease. Crystal Structure of A Domain Swapped 2,3,4,5-Tetrahydropyridine-2,6-Dicarboxylate N-Succinyltransferase From Acinetobacter Baumannii To Be Published.

Page generated: Wed Jul 9 12:31:27 2025

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