Calcium in PDB 6b5v: Structure of TRPV5 in Complex with Econazole

The structure of Structure of TRPV5 in Complex with Econazole also contains other interesting chemical elements:

Chlorine

(Cl)

12 atoms

The binding sites of Calcium atom in the Structure of TRPV5 in Complex with Econazole (pdb code 6b5v). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of TRPV5 in Complex with Econazole, PDB code: 6b5v:

Calcium binding site 1 out of 1 in the Structure of TRPV5 in Complex with Econazole


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of TRPV5 in Complex with Econazole within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1002 b:0.8 occ:1.00 OD2 A:ASP542 3.4 0.8 1.0 OD2 B:ASP542 3.5 0.8 1.0 OD2 C:ASP542 3.5 0.8 1.0 OD2 D:ASP542 3.6 0.8 1.0 CG A:ASP542 3.6 0.8 1.0 CG B:ASP542 3.7 0.8 1.0 CG C:ASP542 3.7 0.8 1.0 CG D:ASP542 3.8 0.8 1.0 CB A:ASP542 4.0 0.8 1.0 CB B:ASP542 4.0 0.8 1.0 CB C:ASP542 4.0 0.8 1.0 OD1 A:ASP542 4.1 0.8 1.0 CB D:ASP542 4.2 0.8 1.0 OD1 B:ASP542 4.2 0.8 1.0 OD1 C:ASP542 4.2 0.8 1.0 OD1 D:ASP542 4.3 0.8 1.0 N A:ASP542 4.6 0.8 1.0 N B:ASP542 4.7 0.8 1.0 N C:ASP542 4.7 0.8 1.0 N D:ASP542 4.8 0.8 1.0 CA A:ASP542 4.9 0.8 1.0 CA B:ASP542 5.0 0.8 1.0

T.E.T.Hughes, D.T.Lodowski, K.W.Huynh, A.Yazici, J.Del Rosario, A.Kapoor, S.Basak, A.Samanta, X.Han, S.Chakrapani, Z.H.Zhou, M.Filizola, T.Rohacs, S.Han, V.Y.Moiseenkova-Bell. Structural Basis of TRPV5 Channel Inhibition By Econazole Revealed By Cryo-Em. Nat. Struct. Mol. Biol. V. 25 53 2018.
ISSN: ESSN 1545-9985
PubMed: 29323279
DOI: 10.1038/S41594-017-0009-1