Calcium in PDB 6c46: Crystal Structure of Dtdp-4-Dehydrorhamnose 3,5-Epimerase From Elizabethkingia Anophelis NUHP1

All present enzymatic activity of Crystal Structure of Dtdp-4-Dehydrorhamnose 3,5-Epimerase From Elizabethkingia Anophelis NUHP1:
5.1.3.13;

The structure of Crystal Structure of Dtdp-4-Dehydrorhamnose 3,5-Epimerase From Elizabethkingia Anophelis NUHP1, PDB code: 6c46 was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.03 / 1.95
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	139.340, 62.240, 131.020, 90.00, 105.02, 90.00
R / Rfree (%)	16 / 20.3

The binding sites of Calcium atom in the Crystal Structure of Dtdp-4-Dehydrorhamnose 3,5-Epimerase From Elizabethkingia Anophelis NUHP1 (pdb code 6c46). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of Dtdp-4-Dehydrorhamnose 3,5-Epimerase From Elizabethkingia Anophelis NUHP1, PDB code: 6c46:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Crystal Structure of Dtdp-4-Dehydrorhamnose 3,5-Epimerase From Elizabethkingia Anophelis NUHP1


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Dtdp-4-Dehydrorhamnose 3,5-Epimerase From Elizabethkingia Anophelis NUHP1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca200 b:18.8 occ:1.00 OE2 A:GLU32 2.3 18.6 1.0 O A:HOH469 2.4 20.5 1.0 O A:HOH470 2.4 22.3 1.0 OE2 A:GLU36 2.4 16.7 1.0 O A:HOH369 2.5 24.1 1.0 OE1 A:GLU36 2.6 18.5 1.0 CD A:GLU36 2.8 12.6 1.0 CD A:GLU32 3.4 22.4 1.0 CG A:GLU32 4.0 17.9 1.0 CG A:GLU36 4.3 12.1 1.0 O A:HOH321 4.4 22.4 1.0 OE1 A:GLU32 4.5 18.4 1.0 CB A:HIS44 4.6 14.7 1.0 O B:HOH396 4.6 47.0 1.0 CE1 B:HIS44 4.7 26.6 1.0 N A:HIS44 4.7 14.6 1.0 OD1 A:ASN42 4.7 14.6 1.0 O A:HOH524 4.8 31.8 1.0 N A:GLY43 4.8 14.6 1.0

Calcium binding site 2 out of 2 in the Crystal Structure of Dtdp-4-Dehydrorhamnose 3,5-Epimerase From Elizabethkingia Anophelis NUHP1


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of Dtdp-4-Dehydrorhamnose 3,5-Epimerase From Elizabethkingia Anophelis NUHP1 within 5.0Å range: probe atom residue distance (Å) B Occ D:Ca200 b:20.6 occ:1.00 OE2 D:GLU32 2.3 16.9 1.0 O D:HOH416 2.4 21.6 1.0 OE2 D:GLU36 2.4 20.4 1.0 O D:HOH412 2.5 23.2 1.0 OE1 D:GLU36 2.5 21.1 1.0 CD D:GLU36 2.8 17.1 1.0 CD D:GLU32 3.4 19.5 1.0 CG D:GLU32 3.9 22.5 1.0 CG D:GLU36 4.3 14.7 1.0 O D:HOH326 4.3 26.8 1.0 OE1 D:GLU32 4.4 16.7 1.0 CB D:HIS44 4.6 19.3 1.0 CE1 C:HIS44 4.6 20.6 1.0 O D:HOH438 4.7 33.3 1.0 N D:HIS44 4.8 16.1 1.0 OD1 D:ASN42 4.8 21.9 1.0 N D:GLY43 4.8 19.0 1.0

J.Abendroth, S.L.Delker, D.D.Lorimer, P.S.Horanyi, T.E.Edwards. Crystal Structure of Dtdp-4-Dehydrorhamnose 3,5-Epimerase From Elizabethkingia Anophelis NUHP1 To Be Published.