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Calcium in PDB 6cdf: Human CTBP1 (28-378)

Protein crystallography data

The structure of Human CTBP1 (28-378), PDB code: 6cdf was solved by W.E.Royer, A.G.Bellesis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.99 / 2.60
Space group P 64 2 2
Cell size a, b, c (Å), α, β, γ (°) 88.657, 88.657, 163.914, 90.00, 90.00, 120.00
R / Rfree (%) 20.7 / 24.5

Calcium Binding Sites:

The binding sites of Calcium atom in the Human CTBP1 (28-378) (pdb code 6cdf). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Human CTBP1 (28-378), PDB code: 6cdf:

Calcium binding site 1 out of 1 in 6cdf

Go back to Calcium Binding Sites List in 6cdf
Calcium binding site 1 out of 1 in the Human CTBP1 (28-378)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Human CTBP1 (28-378) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca402

b:47.3
occ:1.00
HO2 A:FMT403 2.1 59.1 1.0
O A:HOH615 2.2 34.8 1.0
O A:HOH547 2.3 41.5 1.0
O A:HOH556 2.6 42.7 1.0
O2 A:FMT403 2.8 49.3 1.0
O1 A:FMT403 2.8 45.4 1.0
C A:FMT403 3.1 47.0 1.0
HH21 A:ARG285 3.5 62.9 1.0
H A:FMT403 4.1 56.4 1.0
OD1 A:ASP231 4.3 44.1 1.0
NH2 A:ARG285 4.3 52.4 1.0
HE A:ARG285 4.5 68.3 1.0
HB3 A:ASP231 4.5 46.4 1.0
OE1 A:GLU175 4.6 35.1 1.0
O A:GLY258 4.6 45.5 1.0
OE2 A:GLU175 4.6 34.8 1.0
HH22 A:ARG285 4.7 62.9 1.0
O A:HOH523 4.9 46.1 1.0

Reference:

A.G.Bellesis, A.M.Jecrois, J.A.Hayes, C.A.Schiffer, W.E.Royer. Assembly of Human C-Terminal Binding Protein (Ctbp) Into Tetramers. J. Biol. Chem. V. 293 9101 2018.
ISSN: ESSN 1083-351X
PubMed: 29700119
DOI: 10.1074/JBC.RA118.002514
Page generated: Mon Jul 15 17:21:14 2024

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