Calcium in PDB 6cdf: Human CTBP1 (28-378)

Protein crystallography data

The structure of Human CTBP1 (28-378), PDB code: 6cdf was solved by W.E.Royer, A.G.Bellesis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.99 / 2.60
Space group P 64 2 2
Cell size a, b, c (Å), α, β, γ (°) 88.657, 88.657, 163.914, 90.00, 90.00, 120.00
R / Rfree (%) 20.7 / 24.5

Calcium Binding Sites:

The binding sites of Calcium atom in the Human CTBP1 (28-378) (pdb code 6cdf). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Human CTBP1 (28-378), PDB code: 6cdf:

Calcium binding site 1 out of 1 in 6cdf

Go back to Calcium Binding Sites List in 6cdf
Calcium binding site 1 out of 1 in the Human CTBP1 (28-378)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Human CTBP1 (28-378) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca402

b:47.3
occ:1.00
HO2 A:FMT403 2.1 59.1 1.0
O A:HOH615 2.2 34.8 1.0
O A:HOH547 2.3 41.5 1.0
O A:HOH556 2.6 42.7 1.0
O2 A:FMT403 2.8 49.3 1.0
O1 A:FMT403 2.8 45.4 1.0
C A:FMT403 3.1 47.0 1.0
HH21 A:ARG285 3.5 62.9 1.0
H A:FMT403 4.1 56.4 1.0
OD1 A:ASP231 4.3 44.1 1.0
NH2 A:ARG285 4.3 52.4 1.0
HE A:ARG285 4.5 68.3 1.0
HB3 A:ASP231 4.5 46.4 1.0
OE1 A:GLU175 4.6 35.1 1.0
O A:GLY258 4.6 45.5 1.0
OE2 A:GLU175 4.6 34.8 1.0
HH22 A:ARG285 4.7 62.9 1.0
O A:HOH523 4.9 46.1 1.0

Reference:

A.G.Bellesis, A.M.Jecrois, J.A.Hayes, C.A.Schiffer, W.E.Royer. Assembly of Human C-Terminal Binding Protein (Ctbp) Into Tetramers. J. Biol. Chem. V. 293 9101 2018.
ISSN: ESSN 1083-351X
PubMed: 29700119
DOI: 10.1074/JBC.RA118.002514
Page generated: Sat Dec 12 06:01:16 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy