Calcium in PDB 6dys: C-Terminal Condensation Domain of Ebony in Complex with Beta-Alanyl- Dopamine

The structure of C-Terminal Condensation Domain of Ebony in Complex with Beta-Alanyl- Dopamine, PDB code: 6dys was solved by T.Izore, J.Tailhades, M.H.Hansen, J.A.Kaczmarski, C.J.Jackson, M.J.Cryle, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.79 / 2.30
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	44.481, 56.494, 49.934, 90.00, 113.50, 90.00
R / Rfree (%)	17.2 / 20.5

The binding sites of Calcium atom in the C-Terminal Condensation Domain of Ebony in Complex with Beta-Alanyl- Dopamine (pdb code 6dys). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the C-Terminal Condensation Domain of Ebony in Complex with Beta-Alanyl- Dopamine, PDB code: 6dys:

Calcium binding site 1 out of 1 in the C-Terminal Condensation Domain of Ebony in Complex with Beta-Alanyl- Dopamine


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of C-Terminal Condensation Domain of Ebony in Complex with Beta-Alanyl- Dopamine within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca901 b:65.7 occ:1.00 O A:HOH1008 2.3 46.3 1.0 CG A:TYR729 3.9 27.1 1.0 O A:HOH1037 4.0 30.6 1.0 OE1 A:GLU669 4.0 30.2 1.0 CD2 A:TYR729 4.1 30.3 1.0 CD1 A:TYR729 4.2 27.1 1.0 CB A:TYR729 4.3 29.4 1.0 CE2 A:TYR729 4.4 29.2 1.0 CE1 A:TYR729 4.5 24.6 1.0 OD1 A:ASP734 4.6 51.4 1.0 CZ A:TYR729 4.6 31.8 1.0 CD A:GLU669 4.8 30.3 1.0 CG2 A:VAL671 4.8 23.4 1.0

T.Izore, J.Tailhades, M.H.Hansen, J.A.Kaczmarski, C.J.Jackson, M.J.Cryle. Drosophila Melanogasternonribosomal Peptide Synthetase Ebony Encodes An Atypical Condensation Domain. Proc. Natl. Acad. Sci. V. 116 2913 2019U.S.A..
ISSN: ESSN 1091-6490
PubMed: 30705105
DOI: 10.1073/PNAS.1811194116