Calcium in PDB 6e0h: Pdb: AFTMEM16 Reconstituted in Nanodiscs in the Presence of CA2+

The binding sites of Calcium atom in the Pdb: AFTMEM16 Reconstituted in Nanodiscs in the Presence of CA2+ (pdb code 6e0h). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the Pdb: AFTMEM16 Reconstituted in Nanodiscs in the Presence of CA2+, PDB code: 6e0h:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in the Pdb: AFTMEM16 Reconstituted in Nanodiscs in the Presence of CA2+


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Pdb: AFTMEM16 Reconstituted in Nanodiscs in the Presence of CA2+ within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca801 b:98.5 occ:1.00 OE1 B:GLU445 2.6 0.4 1.0 CA B:CA802 2.7 0.7 1.0 OE2 B:GLU514 3.0 75.8 1.0 CD B:GLU514 3.6 75.8 1.0 OE1 B:GLU514 3.6 75.8 1.0 OE2 B:GLU543 3.7 78.4 1.0 CD B:GLU445 3.8 0.4 1.0 O B:GLY441 3.9 0.3 1.0 CD B:GLU543 4.0 78.4 1.0 CG B:GLU543 4.2 78.4 1.0 C B:GLY441 4.3 0.3 1.0 OE2 B:GLU445 4.6 0.4 1.0 CB B:GLU445 4.6 0.4 1.0 N B:PHE442 4.6 0.7 1.0 CA B:PHE442 4.7 0.7 1.0 OE1 B:GLU543 4.7 78.4 1.0 CG B:GLU514 4.8 75.8 1.0 CG B:GLU445 4.8 0.4 1.0 OE1 B:GLN438 4.8 0.8 1.0

Calcium binding site 2 out of 4 in the Pdb: AFTMEM16 Reconstituted in Nanodiscs in the Presence of CA2+


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Pdb: AFTMEM16 Reconstituted in Nanodiscs in the Presence of CA2+ within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca802 b:0.7 occ:1.00 OE2 B:GLU514 2.5 75.8 1.0 OD2 B:ASP547 2.5 86.5 1.0 OD1 B:ASP547 2.6 86.5 1.0 CA B:CA801 2.7 98.5 1.0 OE1 B:GLU445 2.8 0.4 1.0 CG B:ASP547 2.9 86.5 1.0 OE2 B:GLU543 3.0 78.4 1.0 CG B:GLU543 3.0 78.4 1.0 CD B:GLU543 3.4 78.4 1.0 OE2 B:GLU445 3.4 0.4 1.0 CD B:GLU445 3.4 0.4 1.0 CD B:GLU514 3.7 75.8 1.0 OD1 B:ASP511 3.7 76.1 1.0 OG B:SER546 4.2 80.0 1.0 CB B:ASP547 4.3 86.5 1.0 CB B:GLU543 4.4 78.4 1.0 OE1 B:GLU514 4.4 75.8 1.0 O B:GLU543 4.4 78.4 1.0 OE1 B:GLU543 4.6 78.4 1.0 CG B:ASP511 4.6 76.1 1.0 OD2 B:ASP511 4.6 76.1 1.0 CG B:GLU514 4.8 75.8 1.0 CG B:GLU445 4.8 0.4 1.0 CA B:GLU543 4.8 78.4 1.0 CA B:ASP547 5.0 86.5 1.0

Calcium binding site 3 out of 4 in the Pdb: AFTMEM16 Reconstituted in Nanodiscs in the Presence of CA2+


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Pdb: AFTMEM16 Reconstituted in Nanodiscs in the Presence of CA2+ within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca801 b:92.3 occ:1.00 OE1 A:GLU445 2.6 1.0 1.0 CA A:CA802 2.7 0.6 1.0 OE2 A:GLU514 3.0 73.8 1.0 CD A:GLU514 3.6 73.8 1.0 OE1 A:GLU514 3.6 73.8 1.0 OE2 A:GLU543 3.7 77.5 1.0 CD A:GLU445 3.8 1.0 1.0 O A:GLY441 3.9 0.6 1.0 CD A:GLU543 4.0 77.5 1.0 CG A:GLU543 4.2 77.5 1.0 C A:GLY441 4.3 0.6 1.0 OE2 A:GLU445 4.6 1.0 1.0 CB A:GLU445 4.6 1.0 1.0 N A:PHE442 4.6 0.4 1.0 CA A:PHE442 4.7 0.4 1.0 OE1 A:GLU543 4.7 77.5 1.0 CG A:GLU514 4.8 73.8 1.0 CG A:GLU445 4.8 1.0 1.0 OE1 A:GLN438 4.8 0.5 1.0

Calcium binding site 4 out of 4 in the Pdb: AFTMEM16 Reconstituted in Nanodiscs in the Presence of CA2+


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Pdb: AFTMEM16 Reconstituted in Nanodiscs in the Presence of CA2+ within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca802 b:0.6 occ:1.00 OE2 A:GLU514 2.5 73.8 1.0 OD2 A:ASP547 2.5 85.0 1.0 OD1 A:ASP547 2.6 85.0 1.0 CA A:CA801 2.7 92.3 1.0 OE1 A:GLU445 2.8 1.0 1.0 CG A:ASP547 2.9 85.0 1.0 OE2 A:GLU543 3.0 77.5 1.0 CG A:GLU543 3.0 77.5 1.0 CD A:GLU543 3.4 77.5 1.0 OE2 A:GLU445 3.4 1.0 1.0 CD A:GLU445 3.4 1.0 1.0 CD A:GLU514 3.7 73.8 1.0 OD1 A:ASP511 3.7 74.9 1.0 OG A:SER546 4.2 78.5 1.0 CB A:ASP547 4.3 85.0 1.0 OE1 A:GLU514 4.4 73.8 1.0 CB A:GLU543 4.4 77.5 1.0 O A:GLU543 4.4 77.5 1.0 OE1 A:GLU543 4.6 77.5 1.0 CG A:ASP511 4.6 74.9 1.0 OD2 A:ASP511 4.6 74.9 1.0 CG A:GLU514 4.8 73.8 1.0 CG A:GLU445 4.8 1.0 1.0 CA A:GLU543 4.8 77.5 1.0 CA A:ASP547 5.0 85.0 1.0

M.E.Falzone, J.Rheinberger, B.C.Lee, T.Peyear, L.Sasset, A.M.Raczkowski, E.T.Eng, A.Di Lorenzo, O.S.Andersen, C.M.Nimigean, A.Accardi. Structural Basis of CA2+-Dependent Activation and Lipid Transport By A TMEM16 Scramblase. Elife V. 8 2019.
ISSN: ESSN 2050-084X
PubMed: 30648972
DOI: 10.7554/ELIFE.43229