Calcium in PDB 6e5x: Crystal Structure of Ebola Virus VP30 C-Terminus/RBBP6 Peptide Complex

The structure of Crystal Structure of Ebola Virus VP30 C-Terminus/RBBP6 Peptide Complex, PDB code: 6e5x was solved by D.Liu, G.I.Small, D.W.Leung, G.K.Amarasinghe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.83 / 1.50
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	45.600, 45.600, 158.710, 90.00, 90.00, 90.00
R / Rfree (%)	18.9 / 23

The binding sites of Calcium atom in the Crystal Structure of Ebola Virus VP30 C-Terminus/RBBP6 Peptide Complex (pdb code 6e5x). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Ebola Virus VP30 C-Terminus/RBBP6 Peptide Complex, PDB code: 6e5x:

Calcium binding site 1 out of 1 in the Crystal Structure of Ebola Virus VP30 C-Terminus/RBBP6 Peptide Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Ebola Virus VP30 C-Terminus/RBBP6 Peptide Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca301 b:21.0 occ:1.00 O A:ALA155 2.3 22.7 1.0 OD1 A:ASN244 2.3 22.1 1.0 O A:HOH474 2.4 20.8 1.0 O A:HOH473 2.5 20.1 1.0 O A:HOH484 2.5 22.6 1.0 CG A:ASN244 3.4 19.7 1.0 C A:ALA155 3.5 21.6 1.0 ND2 A:ASN244 3.8 21.5 1.0 O A:HOH515 4.2 36.2 1.0 CA A:ALA155 4.2 22.4 1.0 O A:HOH487 4.3 20.9 1.0 N A:ARG156 4.5 24.2 1.0 CB A:ALA155 4.5 23.1 1.0 CB A:ASN244 4.7 20.2 1.0 CA A:ARG156 4.8 24.5 1.0 O A:GLN157 4.8 24.6 1.0 CA A:ASN244 4.9 23.3 1.0 O A:HOH462 4.9 24.2 1.0 O A:THR240 5.0 20.1 1.0

J.Batra, J.F.Hultquist, D.Liu, O.Shtanko, J.Von Dollen, L.Satkamp, G.M.Jang, P.Luthra, T.M.Schwarz, G.I.Small, E.Arnett, M.Anantpadma, A.Reyes, D.W.Leung, R.Kaake, P.Haas, C.B.Schmidt, L.S.Schlesinger, D.J.Lacount, R.A.Davey, G.K.Amarasinghe, C.F.Basler, N.J.Krogan. Protein Interaction Mapping Identifies RBBP6 As A Negative Regulator of Ebola Virus Replication. Cell V. 175 1917 2018.
ISSN: ISSN 1097-4172
PubMed: 30550789
DOI: 10.1016/J.CELL.2018.08.044