Calcium in PDB 6edv: Structure of A Gnat Superfamily Acetyltransferase PA3944 in Complex with Coa

Protein crystallography data

The structure of Structure of A Gnat Superfamily Acetyltransferase PA3944 in Complex with Coa, PDB code: 6edv was solved by K.A.Majorek, K.J.F.Satchell, A.Joachimiak, W.Minor, Center For Structuralgenomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.35
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 36.438, 44.030, 111.641, 90.00, 90.00, 90.00
R / Rfree (%) 13.3 / 16.1

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of A Gnat Superfamily Acetyltransferase PA3944 in Complex with Coa (pdb code 6edv). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of A Gnat Superfamily Acetyltransferase PA3944 in Complex with Coa, PDB code: 6edv:

Calcium binding site 1 out of 1 in 6edv

Go back to Calcium Binding Sites List in 6edv
Calcium binding site 1 out of 1 in the Structure of A Gnat Superfamily Acetyltransferase PA3944 in Complex with Coa


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of A Gnat Superfamily Acetyltransferase PA3944 in Complex with Coa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca201

b:16.8
occ:0.80
O A:HOH412 2.2 37.0 1.0
O A:HOH390 2.3 24.2 1.0
OE1 A:GLU66 2.5 19.0 1.0
OE2 A:GLU66 2.5 17.4 1.0
CD A:GLU66 2.8 17.1 1.0
CG A:GLU66 4.4 14.8 1.0
O A:HOH349 4.5 31.3 1.0
O A:HOH367 4.6 21.7 1.0

Reference:

M.P.Czub, B.Zhang, M.P.Chiarelli, K.A.Majorek, L.Joe, P.J.Porebski, A.Revilla, W.Wu, D.P.Becker, W.Minor, M.L.Kuhn. A GCN5-Related N-Acetyltransferase (Gnat) Capable of Acetylating Polymyxin B and Colistin Antibiotics in Vitro. Biochemistry V. 57 7011 2018.
ISSN: ISSN 1520-4995
PubMed: 30499668
DOI: 10.1021/ACS.BIOCHEM.8B00946
Page generated: Sat Dec 12 06:04:37 2020

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