Calcium in PDB 6elt: C-Terminal Domain of MDPPO1 Upon Self-Cleavage (Ccleaved-Domain)

The structure of C-Terminal Domain of MDPPO1 Upon Self-Cleavage (Ccleaved-Domain), PDB code: 6elt was solved by I.Kampatsikas, A.Bijelic, M.Pretzler, A.Rompel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	35.66 / 1.35
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	45.230, 50.140, 50.720, 90.00, 90.00, 90.00
R / Rfree (%)	17.1 / 20.1

The binding sites of Calcium atom in the C-Terminal Domain of MDPPO1 Upon Self-Cleavage (Ccleaved-Domain) (pdb code 6elt). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the C-Terminal Domain of MDPPO1 Upon Self-Cleavage (Ccleaved-Domain), PDB code: 6elt:

Calcium binding site 1 out of 1 in the C-Terminal Domain of MDPPO1 Upon Self-Cleavage (Ccleaved-Domain)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of C-Terminal Domain of MDPPO1 Upon Self-Cleavage (Ccleaved-Domain) within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca601 b:30.0 occ:1.00 O A:HOH849 2.3 13.2 1.0 OD2 A:ASP479 2.3 10.7 1.0 OD2 A:ASP431 2.4 10.3 1.0 O A:HOH764 2.4 11.2 1.0 OD2 A:ASP429 2.5 9.9 1.0 OD1 A:ASP429 2.5 9.9 1.0 OD1 A:ASP479 2.7 12.1 1.0 CG A:ASP479 2.9 11.1 1.0 CG A:ASP429 2.9 9.7 1.0 CG A:ASP431 3.4 10.4 1.0 CB A:ASP431 3.9 9.5 1.0 O A:HOH792 4.1 28.7 1.0 CB A:ASP479 4.4 11.4 1.0 CB A:ASP429 4.4 10.3 1.0 OD2 A:ASP478 4.4 24.6 1.0 OD1 A:ASP431 4.6 12.5 1.0 OD1 A:ASP478 4.6 21.3 1.0 O A:HOH743 4.6 19.5 1.0 N A:ASP431 4.6 9.8 1.0 O A:HOH753 4.7 12.9 1.0 O A:GLU475 4.8 15.8 1.0 CA A:ASP431 4.9 9.2 1.0 CG A:ASP478 4.9 22.4 1.0 CA A:ALA476 4.9 12.3 1.0

I.Kampatsikas, A.Bijelic, M.Pretzler, A.Rompel. A Peptide-Induced Self-Cleavage Reaction Initiates the Activation of Tyrosinase. Angew.Chem.Int.Ed.Engl. V. 58 7475 2019.
ISSN: ESSN 1521-3773
PubMed: 30825403
DOI: 10.1002/ANIE.201901332