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Calcium in PDB 6f43: Crystal Structure of Apo Form of Glutathione Transferase Omega 3S From Trametes Versicolor

Enzymatic activity of Crystal Structure of Apo Form of Glutathione Transferase Omega 3S From Trametes Versicolor

All present enzymatic activity of Crystal Structure of Apo Form of Glutathione Transferase Omega 3S From Trametes Versicolor:
2.5.1.18;

Protein crystallography data

The structure of Crystal Structure of Apo Form of Glutathione Transferase Omega 3S From Trametes Versicolor, PDB code: 6f43 was solved by M.Schwartz, F.Favier, C.Didierjean, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.88 / 1.35
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 50.480, 104.520, 107.720, 90.00, 90.00, 90.00
R / Rfree (%) 13.7 / 16.8

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Apo Form of Glutathione Transferase Omega 3S From Trametes Versicolor (pdb code 6f43). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Apo Form of Glutathione Transferase Omega 3S From Trametes Versicolor, PDB code: 6f43:

Calcium binding site 1 out of 1 in 6f43

Go back to Calcium Binding Sites List in 6f43
Calcium binding site 1 out of 1 in the Crystal Structure of Apo Form of Glutathione Transferase Omega 3S From Trametes Versicolor


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Apo Form of Glutathione Transferase Omega 3S From Trametes Versicolor within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca305

b:34.0
occ:1.00
 O B:HOH583 2.2 40.8 1.0
O B:GLY145 2.3 15.4 1.0
O B:HOH534 2.3 32.4 1.0
O B:HOH581 2.5 34.0 1.0
C B:GLY145 3.5 14.1 1.0
HA2 B:GLY145 4.0 16.8 1.0
HA B:ALA146 4.2 16.2 1.0
CA B:GLY145 4.2 14.0 1.0
HA3 B:GLY145 4.2 16.8 1.0
N B:ALA146 4.5 13.3 1.0
O B:HOH438 4.6 19.2 1.0
O B:HOH587 4.7 57.5 1.0
O B:LEU147 4.7 15.9 1.0
H41 B:PEG306 4.7 59.3 1.0
CA B:ALA146 4.8 13.5 1.0
O B:HOH650 4.9 47.0 1.0
HD3 B:PRO149 4.9 29.1 1.0
HO4 B:PEG306 5.0 59.9 1.0

Reference:

M.Schwartz, T.Perrot, E.Aubert, S.Dumarcay, F.Favier, P.Gerardin, M.Morel-Rouhier, G.Mulliert, F.Saiag, C.Didierjean, E.Gelhaye. Molecular Recognition of Wood Polyphenols By Phase II Detoxification Enzymes of the White Rot Trametes Versicolor. Sci Rep V. 8 8472 2018.
ISSN: ESSN 2045-2322
PubMed: 29855494
DOI: 10.1038/S41598-018-26601-3
Page generated: Wed Jul 9 14:05:46 2025

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