Calcium in PDB 6f68: Crystal Structure Glutathione Transferase Omega 3S From Trametes Versicolor in Complex with 2,4,4'-Trihydroxybenzophenone

Protein crystallography data

The structure of Crystal Structure Glutathione Transferase Omega 3S From Trametes Versicolor in Complex with 2,4,4'-Trihydroxybenzophenone, PDB code: 6f68 was solved by M.Schwartz, F.Favier, C.Didierjean, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.16 / 1.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 50.680, 104.790, 108.290, 90.00, 90.00, 90.00
R / Rfree (%) 16.1 / 19.2

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure Glutathione Transferase Omega 3S From Trametes Versicolor in Complex with 2,4,4'-Trihydroxybenzophenone (pdb code 6f68). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure Glutathione Transferase Omega 3S From Trametes Versicolor in Complex with 2,4,4'-Trihydroxybenzophenone, PDB code: 6f68:

Calcium binding site 1 out of 1 in 6f68

Go back to Calcium Binding Sites List in 6f68
Calcium binding site 1 out of 1 in the Crystal Structure Glutathione Transferase Omega 3S From Trametes Versicolor in Complex with 2,4,4'-Trihydroxybenzophenone


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure Glutathione Transferase Omega 3S From Trametes Versicolor in Complex with 2,4,4'-Trihydroxybenzophenone within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca304

b:26.4
occ:0.78
O B:HOH545 2.2 33.5 1.0
O B:GLY145 2.3 18.3 1.0
O B:HOH560 2.4 42.0 1.0
O B:HOH497 2.4 29.8 1.0
O B:HOH542 2.6 35.6 1.0
C B:GLY145 3.5 18.3 1.0
HA2 B:GLY145 4.0 24.3 1.0
HA B:ALA146 4.1 20.6 1.0
CA B:GLY145 4.2 20.2 1.0
HA3 B:GLY145 4.3 24.3 1.0
N B:ALA146 4.5 16.6 1.0
O B:HOH438 4.6 23.7 1.0
O B:LEU147 4.7 18.5 1.0
CA B:ALA146 4.7 17.1 1.0
H52 B:PG4301 4.9 61.1 1.0
H61 B:PG4301 5.0 50.5 1.0

Reference:

M.Schwartz, T.Perrot, E.Aubert, S.Dumarcay, F.Favier, P.Gerardin, M.Morel-Rouhier, G.Mulliert, F.Saiag, C.Didierjean, E.Gelhaye. Molecular Recognition of Wood Polyphenols By Phase II Detoxification Enzymes of the White Rot Trametes Versicolor. Sci Rep V. 8 8472 2018.
ISSN: ESSN 2045-2322
PubMed: 29855494
DOI: 10.1038/S41598-018-26601-3
Page generated: Sat Dec 12 06:06:09 2020

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