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Calcium in PDB 6f7v: Crystal Structure of Lkce E64Q Mutant in Complex with Lc-KA05

Enzymatic activity of Crystal Structure of Lkce E64Q Mutant in Complex with Lc-KA05

All present enzymatic activity of Crystal Structure of Lkce E64Q Mutant in Complex with Lc-KA05:
1.4.3.4;

Protein crystallography data

The structure of Crystal Structure of Lkce E64Q Mutant in Complex with Lc-KA05, PDB code: 6f7v was solved by J.Dorival, F.Risser, C.Jacob, S.Collin, G.Drager, A.Kirschning, C.Paris, B.Chagot, A.Gruez, K.J.Weissman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.00 / 3.03
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 124.834, 124.834, 157.392, 90.00, 90.00, 90.00
R / Rfree (%) 19.1 / 24.7

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Lkce E64Q Mutant in Complex with Lc-KA05 (pdb code 6f7v). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Lkce E64Q Mutant in Complex with Lc-KA05, PDB code: 6f7v:

Calcium binding site 1 out of 1 in 6f7v

Go back to Calcium Binding Sites List in 6f7v
Calcium binding site 1 out of 1 in the Crystal Structure of Lkce E64Q Mutant in Complex with Lc-KA05


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Lkce E64Q Mutant in Complex with Lc-KA05 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca502

b:0.2
occ:0.50
OE2 A:GLU114 3.1 94.8 1.0
OE1 A:GLU111 3.7 84.3 1.0
OE2 A:GLU111 3.9 72.5 1.0
CD A:GLU114 4.2 89.5 1.0
CD A:GLU111 4.3 69.3 1.0
OE1 A:GLU114 4.8 0.1 1.0

Reference:

J.Dorival, F.Risser, C.Jacob, S.Collin, G.Drager, C.Paris, B.Chagot, A.Kirschning, A.Gruez, K.J.Weissman. Insights Into A Dual Function Amide Oxidase/Macrocyclase From Lankacidin Biosynthesis. Nat Commun V. 9 3998 2018.
ISSN: ESSN 2041-1723
PubMed: 30266997
DOI: 10.1038/S41467-018-06323-W
Page generated: Wed Jul 9 14:08:05 2025

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