Calcium in PDB 6fcg: Crystal Structure of An Endo-Laminarinase From Formosa HEL1_33_131

The structure of Crystal Structure of An Endo-Laminarinase From Formosa HEL1_33_131, PDB code: 6fcg was solved by S.Becker, C.S.Robb, J.H.Hehemann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	104.32 / 2.60
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	93.336, 149.143, 107.217, 90.00, 103.35, 90.00
R / Rfree (%)	20.5 / 23.9

The binding sites of Calcium atom in the Crystal Structure of An Endo-Laminarinase From Formosa HEL1_33_131 (pdb code 6fcg). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of An Endo-Laminarinase From Formosa HEL1_33_131, PDB code: 6fcg:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Crystal Structure of An Endo-Laminarinase From Formosa HEL1_33_131


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of An Endo-Laminarinase From Formosa HEL1_33_131 within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca501 b:37.2 occ:1.00 O E:HOH522 2.3 9.7 1.0 O B:HOH610 2.4 14.4 1.0 O F:HOH552 2.4 13.7 1.0 O F:HOH501 2.5 6.6 1.0 OD2 B:ASP220 3.7 24.6 1.0 OD1 E:ASP220 3.9 26.9 1.0 OD1 B:ASP220 3.9 24.1 1.0 OD2 E:ASP220 4.0 30.4 1.0 OE1 B:GLN222 4.0 28.4 1.0 O E:HOH644 4.0 18.1 1.0 CG B:ASP220 4.2 22.1 1.0 CG E:ASP220 4.4 25.5 1.0 O B:HOH699 4.5 19.9 1.0 CB B:GLN222 4.7 23.2 1.0 OD2 F:ASP220 4.7 24.1 1.0 OD1 F:ASP220 4.8 24.9 1.0 O F:HOH642 4.8 31.5 1.0 CD B:GLN222 4.9 26.3 1.0 OE1 E:GLN222 5.0 30.1 1.0

Calcium binding site 2 out of 2 in the Crystal Structure of An Endo-Laminarinase From Formosa HEL1_33_131


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of An Endo-Laminarinase From Formosa HEL1_33_131 within 5.0Å range: probe atom residue distance (Å) B Occ C:Ca501 b:45.7 occ:1.00 O D:HOH504 2.2 26.3 1.0 O A:HOH519 2.3 20.2 1.0 O C:HOH707 2.7 44.6 1.0 O D:HOH609 3.4 25.3 1.0 OD1 D:ASP220 4.0 28.3 1.0 O A:HOH599 4.0 20.5 1.0 OD2 D:ASP220 4.1 25.8 1.0 OD2 C:ASP220 4.3 29.1 1.0 OD1 C:ASP220 4.3 26.6 1.0 OD2 A:ASP220 4.3 25.0 1.0 OE1 C:GLN222 4.4 25.3 1.0 OD1 A:ASP220 4.4 27.6 1.0 CG D:ASP220 4.5 26.0 1.0 OE1 A:GLN222 4.6 33.6 1.0 OE1 D:GLN222 4.7 30.9 1.0 CG C:ASP220 4.8 25.9 1.0 CG A:ASP220 4.8 25.9 1.0 CB C:GLN222 4.9 22.5 1.0 CB D:GLN222 5.0 29.1 1.0

F.Unfried, S.Becker, C.S.Robb, J.H.Hehemann, S.Markert, S.E.Heiden, T.Hinzke, D.Becher, G.Reintjes, K.Kruger, L.Kappelmann, R.L.Hahnke, T.Fischer, J.Harder, H.Teeling, B.Fuchs, T.Barbeyron, R.I.Amann, T.Schweder. Adaptive Mechanisms That Provide Competitive Advantages to Marine Bacteroidetes During Microalgal Blooms. Isme J V. 12 2894 2018.
ISSN: ESSN 1751-7370
PubMed: 30061707
DOI: 10.1038/S41396-018-0243-5