Calcium in PDB 6feh: Solution Structure of Cam/KV7.2-Hab Complex
Calcium Binding Sites:
The binding sites of Calcium atom in the Solution Structure of Cam/KV7.2-Hab Complex
(pdb code 6feh). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the
Solution Structure of Cam/KV7.2-Hab Complex, PDB code: 6feh:
Jump to Calcium binding site number:
1;
2;
3;
4;
Calcium binding site 1 out
of 4 in 6feh
Go back to
Calcium Binding Sites List in 6feh
Calcium binding site 1 out
of 4 in the Solution Structure of Cam/KV7.2-Hab Complex
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Solution Structure of Cam/KV7.2-Hab Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca301
b:0.0
occ:1.00
|
OD1
|
B:ASP20
|
2.1
|
0.0
|
1.0
|
OD1
|
B:ASP22
|
2.1
|
0.0
|
1.0
|
OD1
|
B:ASP24
|
2.2
|
0.0
|
1.0
|
OE2
|
B:GLU31
|
2.2
|
0.0
|
1.0
|
O
|
B:THR26
|
2.3
|
0.0
|
1.0
|
OE1
|
B:GLU31
|
2.3
|
0.0
|
1.0
|
CD
|
B:GLU31
|
2.6
|
0.0
|
1.0
|
CG
|
B:ASP22
|
3.1
|
0.0
|
1.0
|
CG
|
B:ASP24
|
3.2
|
0.0
|
1.0
|
H
|
B:ASP24
|
3.2
|
0.0
|
1.0
|
CG
|
B:ASP20
|
3.3
|
0.0
|
1.0
|
H
|
B:THR26
|
3.4
|
0.0
|
1.0
|
C
|
B:THR26
|
3.5
|
0.0
|
1.0
|
OD2
|
B:ASP22
|
3.5
|
0.0
|
1.0
|
HA
|
B:ILE27
|
3.5
|
0.0
|
1.0
|
H
|
B:GLY23
|
3.6
|
0.0
|
1.0
|
H
|
B:ASP22
|
3.6
|
0.0
|
1.0
|
H
|
B:LYS21
|
3.7
|
0.0
|
1.0
|
OD2
|
B:ASP24
|
3.8
|
0.0
|
1.0
|
HA
|
B:ASP20
|
3.8
|
0.0
|
1.0
|
H
|
B:THR28
|
4.0
|
0.0
|
1.0
|
CG
|
B:GLU31
|
4.0
|
0.0
|
1.0
|
N
|
B:ASP24
|
4.1
|
0.0
|
1.0
|
OD2
|
B:ASP20
|
4.1
|
0.0
|
1.0
|
N
|
B:THR26
|
4.2
|
0.0
|
1.0
|
N
|
B:GLY23
|
4.2
|
0.0
|
1.0
|
H
|
B:GLY25
|
4.2
|
0.0
|
1.0
|
HG23
|
B:THR26
|
4.2
|
0.0
|
1.0
|
HG3
|
B:GLU31
|
4.2
|
0.0
|
1.0
|
N
|
B:ASP22
|
4.3
|
0.0
|
1.0
|
CB
|
B:ASP24
|
4.3
|
0.0
|
1.0
|
CB
|
B:ASP20
|
4.3
|
0.0
|
1.0
|
N
|
B:ILE27
|
4.3
|
0.0
|
1.0
|
CA
|
B:ILE27
|
4.3
|
0.0
|
1.0
|
CB
|
B:ASP22
|
4.4
|
0.0
|
1.0
|
HG22
|
B:THR28
|
4.4
|
0.0
|
1.0
|
N
|
B:LYS21
|
4.4
|
0.0
|
1.0
|
HG2
|
B:GLU31
|
4.4
|
0.0
|
1.0
|
CA
|
B:THR26
|
4.4
|
0.0
|
1.0
|
HB3
|
B:ASP24
|
4.5
|
0.0
|
1.0
|
CA
|
B:ASP20
|
4.5
|
0.0
|
1.0
|
HB2
|
B:ASP20
|
4.5
|
0.0
|
1.0
|
CA
|
B:ASP24
|
4.6
|
0.0
|
1.0
|
N
|
B:THR28
|
4.6
|
0.0
|
1.0
|
CA
|
B:ASP22
|
4.7
|
0.0
|
1.0
|
N
|
B:GLY25
|
4.7
|
0.0
|
1.0
|
HG22
|
B:THR26
|
4.7
|
0.0
|
1.0
|
C
|
B:ASP22
|
4.8
|
0.0
|
1.0
|
HB3
|
B:ASP22
|
4.8
|
0.0
|
1.0
|
CG2
|
B:THR26
|
4.9
|
0.0
|
1.0
|
C
|
B:ASP20
|
4.9
|
0.0
|
1.0
|
HB2
|
B:GLU31
|
4.9
|
0.0
|
1.0
|
C
|
B:ASP24
|
5.0
|
0.0
|
1.0
|
CB
|
B:GLU31
|
5.0
|
0.0
|
1.0
|
C
|
B:ILE27
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 2 out
of 4 in 6feh
Go back to
Calcium Binding Sites List in 6feh
Calcium binding site 2 out
of 4 in the Solution Structure of Cam/KV7.2-Hab Complex
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Solution Structure of Cam/KV7.2-Hab Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca302
b:0.0
occ:1.00
|
OE1
|
B:GLU67
|
2.2
|
0.0
|
1.0
|
OD1
|
B:ASP56
|
2.2
|
0.0
|
1.0
|
OE2
|
B:GLU67
|
2.2
|
0.0
|
1.0
|
OD1
|
B:ASN60
|
2.3
|
0.0
|
1.0
|
OD2
|
B:ASP56
|
2.3
|
0.0
|
1.0
|
CD
|
B:GLU67
|
2.5
|
0.0
|
1.0
|
CG
|
B:ASP56
|
2.5
|
0.0
|
1.0
|
CG
|
B:ASN60
|
3.4
|
0.0
|
1.0
|
HB3
|
B:ASP58
|
3.6
|
0.0
|
1.0
|
HB2
|
B:ASN60
|
3.7
|
0.0
|
1.0
|
H
|
B:ASP58
|
3.8
|
0.0
|
1.0
|
CB
|
B:ASP56
|
3.9
|
0.0
|
1.0
|
CG
|
B:GLU67
|
4.0
|
0.0
|
1.0
|
H
|
B:ASN60
|
4.0
|
0.0
|
1.0
|
CB
|
B:ASN60
|
4.1
|
0.0
|
1.0
|
HB2
|
B:ASP56
|
4.2
|
0.0
|
1.0
|
HG2
|
B:GLU67
|
4.2
|
0.0
|
1.0
|
HA
|
B:ASP56
|
4.3
|
0.0
|
1.0
|
HB3
|
B:ASP64
|
4.3
|
0.0
|
1.0
|
ND2
|
B:ASN60
|
4.4
|
0.0
|
1.0
|
HD21
|
B:ASN60
|
4.4
|
0.0
|
1.0
|
HG3
|
B:GLU67
|
4.5
|
0.0
|
1.0
|
CB
|
B:ASP58
|
4.5
|
0.0
|
1.0
|
H
|
B:ALA57
|
4.5
|
0.0
|
1.0
|
H
|
B:GLY59
|
4.6
|
0.0
|
1.0
|
HB2
|
B:ASP58
|
4.6
|
0.0
|
1.0
|
HB3
|
B:ASP56
|
4.6
|
0.0
|
1.0
|
N
|
B:ASP58
|
4.6
|
0.0
|
1.0
|
CA
|
B:ASP56
|
4.7
|
0.0
|
1.0
|
N
|
B:ASN60
|
4.7
|
0.0
|
1.0
|
HB2
|
B:ASP64
|
4.7
|
0.0
|
1.0
|
HB2
|
B:GLU67
|
4.8
|
0.0
|
1.0
|
HB3
|
B:ASN60
|
4.8
|
0.0
|
1.0
|
H
|
B:ASP64
|
4.8
|
0.0
|
1.0
|
N
|
B:ALA57
|
4.9
|
0.0
|
1.0
|
HB3
|
B:ALA57
|
4.9
|
0.0
|
1.0
|
CB
|
B:GLU67
|
4.9
|
0.0
|
1.0
|
N
|
B:GLY59
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 3 out
of 4 in 6feh
Go back to
Calcium Binding Sites List in 6feh
Calcium binding site 3 out
of 4 in the Solution Structure of Cam/KV7.2-Hab Complex
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Solution Structure of Cam/KV7.2-Hab Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca303
b:0.0
occ:1.00
|
OD1
|
B:ASP95
|
2.0
|
0.0
|
1.0
|
OD1
|
B:ASP93
|
2.1
|
0.0
|
1.0
|
OD2
|
B:ASP93
|
2.2
|
0.0
|
1.0
|
O
|
B:TYR99
|
2.3
|
0.0
|
1.0
|
H
|
B:TYR99
|
2.3
|
0.0
|
1.0
|
CG
|
B:ASP93
|
2.5
|
0.0
|
1.0
|
CG
|
B:ASP95
|
2.8
|
0.0
|
1.0
|
H
|
B:ASN97
|
2.9
|
0.0
|
1.0
|
N
|
B:TYR99
|
2.9
|
0.0
|
1.0
|
OD2
|
B:ASP95
|
3.0
|
0.0
|
1.0
|
H
|
B:GLY98
|
3.0
|
0.0
|
1.0
|
C
|
B:TYR99
|
3.1
|
0.0
|
1.0
|
N
|
B:GLY98
|
3.3
|
0.0
|
1.0
|
N
|
B:ASN97
|
3.5
|
0.0
|
1.0
|
H
|
B:ASP95
|
3.6
|
0.0
|
1.0
|
CA
|
B:TYR99
|
3.6
|
0.0
|
1.0
|
H
|
B:GLY96
|
3.6
|
0.0
|
1.0
|
HB2
|
B:ASN97
|
3.7
|
0.0
|
1.0
|
C
|
B:GLY98
|
3.8
|
0.0
|
1.0
|
C
|
B:ASN97
|
3.8
|
0.0
|
1.0
|
CA
|
B:GLY98
|
4.0
|
0.0
|
1.0
|
HA
|
B:ILE100
|
4.0
|
0.0
|
1.0
|
N
|
B:GLY96
|
4.0
|
0.0
|
1.0
|
CG
|
B:TYR99
|
4.0
|
0.0
|
1.0
|
CA
|
B:ASN97
|
4.0
|
0.0
|
1.0
|
CB
|
B:ASP93
|
4.1
|
0.0
|
1.0
|
CD2
|
B:TYR99
|
4.1
|
0.0
|
1.0
|
CB
|
B:ASP95
|
4.1
|
0.0
|
1.0
|
N
|
B:ILE100
|
4.2
|
0.0
|
1.0
|
HZ3
|
B:LYS94
|
4.2
|
0.0
|
1.0
|
CD1
|
B:TYR99
|
4.3
|
0.0
|
1.0
|
N
|
B:ASP95
|
4.3
|
0.0
|
1.0
|
HA2
|
B:GLY98
|
4.3
|
0.0
|
1.0
|
HD2
|
B:TYR99
|
4.3
|
0.0
|
1.0
|
CB
|
B:ASN97
|
4.4
|
0.0
|
1.0
|
CB
|
B:TYR99
|
4.4
|
0.0
|
1.0
|
HA
|
B:TYR99
|
4.4
|
0.0
|
1.0
|
CE2
|
B:TYR99
|
4.4
|
0.0
|
1.0
|
HE2
|
B:TYR138
|
4.4
|
0.0
|
1.0
|
C
|
B:ASP95
|
4.4
|
0.0
|
1.0
|
HB2
|
B:ASP93
|
4.4
|
0.0
|
1.0
|
HG3
|
B:LYS94
|
4.4
|
0.0
|
1.0
|
C
|
B:GLY96
|
4.5
|
0.0
|
1.0
|
CA
|
B:ASP95
|
4.5
|
0.0
|
1.0
|
HB3
|
B:ASP93
|
4.5
|
0.0
|
1.0
|
HA
|
B:ASP93
|
4.6
|
0.0
|
1.0
|
CE1
|
B:TYR99
|
4.6
|
0.0
|
1.0
|
CA
|
B:ILE100
|
4.6
|
0.0
|
1.0
|
HD1
|
B:TYR99
|
4.6
|
0.0
|
1.0
|
HB2
|
B:ASP95
|
4.6
|
0.0
|
1.0
|
CA
|
B:GLY96
|
4.7
|
0.0
|
1.0
|
CZ
|
B:TYR99
|
4.7
|
0.0
|
1.0
|
HH
|
B:TYR138
|
4.7
|
0.0
|
1.0
|
O
|
B:ASN97
|
4.7
|
0.0
|
1.0
|
HB3
|
B:ASP95
|
4.7
|
0.0
|
1.0
|
HA3
|
B:GLY98
|
4.8
|
0.0
|
1.0
|
O
|
B:GLY98
|
4.8
|
0.0
|
1.0
|
HE2
|
B:TYR99
|
4.8
|
0.0
|
1.0
|
CA
|
B:ASP93
|
4.9
|
0.0
|
1.0
|
HB
|
B:ILE100
|
4.9
|
0.0
|
1.0
|
HB3
|
B:TYR99
|
4.9
|
0.0
|
1.0
|
HA2
|
B:GLY96
|
4.9
|
0.0
|
1.0
|
H
|
B:ILE100
|
4.9
|
0.0
|
1.0
|
HA
|
B:ASN97
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 4 out
of 4 in 6feh
Go back to
Calcium Binding Sites List in 6feh
Calcium binding site 4 out
of 4 in the Solution Structure of Cam/KV7.2-Hab Complex
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of Solution Structure of Cam/KV7.2-Hab Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca304
b:0.0
occ:1.00
|
OD1
|
B:ASP131
|
1.7
|
0.0
|
1.0
|
O
|
B:GLN135
|
1.8
|
0.0
|
1.0
|
OD1
|
B:ASP133
|
2.2
|
0.0
|
1.0
|
CG
|
B:ASP131
|
2.2
|
0.0
|
1.0
|
OD2
|
B:ASP131
|
2.2
|
0.0
|
1.0
|
HG3
|
B:GLN135
|
2.8
|
0.0
|
1.0
|
C
|
B:GLN135
|
3.0
|
0.0
|
1.0
|
O
|
B:ASP133
|
3.3
|
0.0
|
1.0
|
CG
|
B:ASP133
|
3.3
|
0.0
|
1.0
|
HA
|
B:VAL136
|
3.4
|
0.0
|
1.0
|
HG22
|
B:VAL136
|
3.6
|
0.0
|
1.0
|
CB
|
B:ASP131
|
3.6
|
0.0
|
1.0
|
CG
|
B:GLN135
|
3.7
|
0.0
|
1.0
|
OD2
|
B:ASP133
|
3.8
|
0.0
|
1.0
|
H
|
B:ASP131
|
3.8
|
0.0
|
1.0
|
HG2
|
B:GLN135
|
3.9
|
0.0
|
1.0
|
HB2
|
B:ASP131
|
3.9
|
0.0
|
1.0
|
N
|
B:VAL136
|
3.9
|
0.0
|
1.0
|
CA
|
B:GLN135
|
4.0
|
0.0
|
1.0
|
HE21
|
B:GLN135
|
4.0
|
0.0
|
1.0
|
O
|
B:ASP131
|
4.1
|
0.0
|
1.0
|
N
|
B:GLN135
|
4.1
|
0.0
|
1.0
|
C
|
B:ASP133
|
4.1
|
0.0
|
1.0
|
CA
|
B:VAL136
|
4.1
|
0.0
|
1.0
|
H
|
B:GLN135
|
4.1
|
0.0
|
1.0
|
HG23
|
B:VAL136
|
4.1
|
0.0
|
1.0
|
HB3
|
B:ASP131
|
4.2
|
0.0
|
1.0
|
CG2
|
B:VAL136
|
4.3
|
0.0
|
1.0
|
CA
|
B:ASP131
|
4.3
|
0.0
|
1.0
|
C
|
B:ASP131
|
4.3
|
0.0
|
1.0
|
CB
|
B:GLN135
|
4.4
|
0.0
|
1.0
|
HG23
|
B:ILE130
|
4.4
|
0.0
|
1.0
|
N
|
B:ASP131
|
4.4
|
0.0
|
1.0
|
H
|
B:ASP133
|
4.4
|
0.0
|
1.0
|
CB
|
B:ASP133
|
4.5
|
0.0
|
1.0
|
HG22
|
B:ILE130
|
4.5
|
0.0
|
1.0
|
HB2
|
B:GLN135
|
4.6
|
0.0
|
1.0
|
N
|
B:ASP133
|
4.6
|
0.0
|
1.0
|
C
|
B:GLY134
|
4.6
|
0.0
|
1.0
|
CA
|
B:ASP133
|
4.6
|
0.0
|
1.0
|
NE2
|
B:GLN135
|
4.6
|
0.0
|
1.0
|
CD
|
B:GLN135
|
4.7
|
0.0
|
1.0
|
H
|
B:VAL136
|
4.8
|
0.0
|
1.0
|
CB
|
B:VAL136
|
4.9
|
0.0
|
1.0
|
HA
|
B:GLN135
|
4.9
|
0.0
|
1.0
|
CG2
|
B:ILE130
|
4.9
|
0.0
|
1.0
|
HB2
|
B:ASP133
|
4.9
|
0.0
|
1.0
|
O
|
B:GLY134
|
5.0
|
0.0
|
1.0
|
N
|
B:GLY134
|
5.0
|
0.0
|
1.0
|
|
Reference:
G.Bernardo-Seisdedos,
E.Nunez,
C.Gomis,
C.Malo,
A.Villarroel,
O.Millet.
Structural Basis and Energy Landscape For the CA2+Gating and Calmodulation of the KV7.2 K+Channel. Proc. Natl. Acad. Sci. V. 115 2395 2018U.S.A..
ISSN: ESSN 1091-6490
PubMed: 29463698
DOI: 10.1073/PNAS.1800235115
Page generated: Tue Jul 16 07:43:37 2024
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