Calcium in PDB 6g84: Structure of CDC14 Bound to CBK1 Pxl Motif

Enzymatic activity of Structure of CDC14 Bound to CBK1 Pxl Motif

All present enzymatic activity of Structure of CDC14 Bound to CBK1 Pxl Motif:
3.1.3.48;

Protein crystallography data

The structure of Structure of CDC14 Bound to CBK1 Pxl Motif, PDB code: 6g84 was solved by S.Mouilleron, M.Kataria, F.Uhlmann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 55.29 / 2.47
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 174.500, 73.930, 83.530, 90.00, 114.27, 90.00
R / Rfree (%) 22.6 / 27

Other elements in 6g84:

The structure of Structure of CDC14 Bound to CBK1 Pxl Motif also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of CDC14 Bound to CBK1 Pxl Motif (pdb code 6g84). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Structure of CDC14 Bound to CBK1 Pxl Motif, PDB code: 6g84:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 6g84

Go back to Calcium Binding Sites List in 6g84
Calcium binding site 1 out of 2 in the Structure of CDC14 Bound to CBK1 Pxl Motif


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of CDC14 Bound to CBK1 Pxl Motif within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca401

b:0.4
occ:0.50
OD1 A:ASN9 2.5 56.5 1.0
CG A:ASN9 3.4 54.4 1.0
ND2 A:ASN9 3.7 54.7 1.0
O A:ASP121 4.2 53.2 1.0
CD A:PRO122 4.4 51.7 1.0
OD1 A:ASP8 4.7 87.1 1.0
CB A:ASN9 4.7 52.0 1.0

Calcium binding site 2 out of 2 in 6g84

Go back to Calcium Binding Sites List in 6g84
Calcium binding site 2 out of 2 in the Structure of CDC14 Bound to CBK1 Pxl Motif


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Structure of CDC14 Bound to CBK1 Pxl Motif within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca401

b:99.8
occ:0.50
OD1 B:ASN9 2.5 59.4 1.0
CG B:ASN9 3.3 62.9 1.0
ND2 B:ASN9 3.5 64.8 1.0
O B:ASP121 4.2 63.2 1.0
OD1 B:ASP8 4.5 96.2 1.0
CD B:PRO122 4.6 56.8 1.0
CB B:ASN9 4.6 57.1 1.0
OD2 B:ASP8 4.8 99.3 1.0

Reference:

M.Kataria, S.Mouilleron, M.H.Seo, C.Corbi-Verge, P.M.Kim, F.Uhlmann. A Pxl Motif Promotes Timely Cell Cycle Substrate Dephosphorylation By the CDC14 Phosphatase. Nat. Struct. Mol. Biol. V. 25 1093 2018.
ISSN: ESSN 1545-9985
PubMed: 30455435
DOI: 10.1038/S41594-018-0152-3
Page generated: Sat Dec 12 06:08:05 2020

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