Atomistry » Calcium » PDB 6fzv-6gux » 6gku
Atomistry »
  Calcium »
    PDB 6fzv-6gux »
      6gku »

Calcium in PDB 6gku: Structure of Galectin-10 in Complex with the Fab Fragment of A Charcot-Leyden Crystal Solubilizing Antibody, 6F5

Protein crystallography data

The structure of Structure of Galectin-10 in Complex with the Fab Fragment of A Charcot-Leyden Crystal Solubilizing Antibody, 6F5, PDB code: 6gku was solved by K.Verstraete, K.Verschueren, S.N.Savvides, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.24 / 1.91
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 59.014, 146.186, 185.697, 90.00, 90.00, 90.00
R / Rfree (%) 16.6 / 20.1

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of Galectin-10 in Complex with the Fab Fragment of A Charcot-Leyden Crystal Solubilizing Antibody, 6F5 (pdb code 6gku). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of Galectin-10 in Complex with the Fab Fragment of A Charcot-Leyden Crystal Solubilizing Antibody, 6F5, PDB code: 6gku:

Calcium binding site 1 out of 1 in 6gku

Go back to Calcium Binding Sites List in 6gku
Calcium binding site 1 out of 1 in the Structure of Galectin-10 in Complex with the Fab Fragment of A Charcot-Leyden Crystal Solubilizing Antibody, 6F5


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of Galectin-10 in Complex with the Fab Fragment of A Charcot-Leyden Crystal Solubilizing Antibody, 6F5 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca201

b:89.0
occ:1.00
OG A:SER109 2.7 32.9 1.0
O A:HOH448 3.0 65.5 1.0
ND2 A:ASN80 3.1 35.9 1.0
CG A:GLN107 3.1 64.5 1.0
NE2 A:GLN107 3.3 79.0 1.0
O A:SER108 3.4 35.9 1.0
CB A:SER109 3.4 29.9 1.0
CD A:GLN107 3.5 88.1 1.0
CA A:SER109 3.6 28.5 1.0
O A:HOH329 3.7 59.1 1.0
OD1 A:ASN80 3.8 42.9 1.0
CB A:PRO82 3.8 35.7 1.0
CG A:PRO82 3.9 39.2 1.0
CG A:ASN80 3.9 47.8 1.0
C A:SER108 4.1 34.6 1.0
O A:HOH313 4.2 70.0 1.0
N A:SER109 4.3 28.8 1.0
CB A:GLN107 4.4 38.2 1.0
O A:GLN107 4.4 35.3 1.0
CD A:PRO82 4.5 34.4 1.0
OE1 A:GLN107 4.5 80.4 1.0
C A:GLN107 4.7 37.6 1.0
C A:SER109 4.8 33.4 1.0
O A:SER109 4.8 33.4 1.0
O A:HOH469 4.9 65.8 1.0

Reference:

E.K.Persson, K.Verstraete, I.Heyndrickx, E.Gevaert, H.Aegerter, J.M.Percier, K.Deswarte, K.H.G.Verschueren, A.Dansercoer, D.Gras, P.Chanez, C.Bachert, A.Goncalves, H.Van Gorp, H.De Haard, C.Blanchetot, M.Saunders, H.Hammad, S.N.Savvides, B.N.Lambrecht. Protein Crystallization Promotes Type 2 Immunity and Is Reversible By Antibody Treatment. Science V. 364 2019.
ISSN: ESSN 1095-9203
PubMed: 31123109
DOI: 10.1126/SCIENCE.AAW4295
Page generated: Tue Jul 16 08:05:38 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy