Calcium in PDB 6inz: Crystal Structure of Solute-Binding Protein Complexed with Unsaturated Hyaluronan Disaccharide

The structure of Crystal Structure of Solute-Binding Protein Complexed with Unsaturated Hyaluronan Disaccharide, PDB code: 6inz was solved by S.Oiki, B.Mikami, K.Murata, W.Hashimoto, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	41.41 / 2.29
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	48.740, 97.501, 132.443, 90.00, 90.00, 90.00
R / Rfree (%)	16 / 21.7

The binding sites of Calcium atom in the Crystal Structure of Solute-Binding Protein Complexed with Unsaturated Hyaluronan Disaccharide (pdb code 6inz). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Solute-Binding Protein Complexed with Unsaturated Hyaluronan Disaccharide, PDB code: 6inz:

Calcium binding site 1 out of 1 in the Crystal Structure of Solute-Binding Protein Complexed with Unsaturated Hyaluronan Disaccharide


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Solute-Binding Protein Complexed with Unsaturated Hyaluronan Disaccharide within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca611 b:47.3 occ:1.00 OD1 A:ASN191 2.3 44.6 1.0 O A:LYS195 2.3 51.4 1.0 OD1 A:ASP189 2.3 51.7 1.0 OD1 A:ASP197 2.4 45.6 1.0 OD1 A:ASN193 2.5 55.5 1.0 OE2 A:GLU198 2.5 47.0 1.0 OE1 A:GLU198 2.8 50.6 1.0 CD A:GLU198 2.9 47.3 1.0 CG A:ASN191 3.1 44.0 1.0 CG A:ASN193 3.3 53.6 1.0 ND2 A:ASN191 3.4 48.3 1.0 C A:LYS195 3.4 55.9 1.0 CG A:ASP189 3.5 54.0 1.0 CG A:ASP197 3.5 43.5 1.0 ND2 A:ASN193 3.7 46.1 1.0 N A:LYS195 3.9 58.7 1.0 OD2 A:ASP197 4.0 43.0 1.0 CA A:LYS195 4.2 58.0 1.0 N A:ASP197 4.2 44.5 1.0 CA A:ASP189 4.2 46.8 1.0 N A:ASN193 4.3 49.2 1.0 CB A:ASP189 4.4 43.3 1.0 OD2 A:ASP189 4.4 57.8 1.0 CG A:GLU198 4.4 48.2 1.0 CB A:ASN191 4.4 39.4 1.0 CB A:ASN193 4.5 44.9 1.0 N A:LYS196 4.5 52.3 1.0 O A:HOH813 4.5 50.0 1.0 C A:ASP189 4.5 46.3 1.0 N A:GLY194 4.6 53.0 1.0 N A:GLY192 4.6 56.8 1.0 N A:ASN191 4.6 46.4 1.0 CB A:LYS195 4.6 53.1 1.0 C A:ASN191 4.6 54.4 1.0 CA A:ASN193 4.7 46.7 1.0 N A:GLU198 4.7 49.5 1.0 CA A:ASN191 4.8 49.0 1.0 C A:ASN193 4.8 52.4 1.0 O A:ASP189 4.8 45.5 1.0 CA A:LYS196 4.8 55.0 1.0 CB A:ASP197 4.8 43.1 1.0 C A:GLY194 4.9 60.5 1.0 CA A:ASP197 5.0 47.3 1.0

S.Oiki, M.Sato, B.Mikami, K.Murata, W.Hashimoto. Substrate Recognition By Bacterial Solute-Binding Protein Is Responsible For Import of Extracellular Hyaluronan and Chondroitin Sulfate From the Animal Host. Biosci.Biotechnol.Biochem. V. 83 1946 2019.
ISSN: ISSN 0916-8451
PubMed: 31204616
DOI: 10.1080/09168451.2019.1630250