Calcium in PDB 6j3g: Crystal Structure of An Apo Form of the Glutathione S-Transferase, CSGST83044, of Ceriporiopsis Subvermispora

The structure of Crystal Structure of An Apo Form of the Glutathione S-Transferase, CSGST83044, of Ceriporiopsis Subvermispora, PDB code: 6j3g was solved by W.H.W.Osman, B.Mikami, N.Saka, K.Kondo, T.Nagata, M.Katahira, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.91 / 1.95
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	176.810, 48.645, 74.308, 90.00, 93.17, 90.00
R / Rfree (%)	15.7 / 20.2

The binding sites of Calcium atom in the Crystal Structure of An Apo Form of the Glutathione S-Transferase, CSGST83044, of Ceriporiopsis Subvermispora (pdb code 6j3g). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of An Apo Form of the Glutathione S-Transferase, CSGST83044, of Ceriporiopsis Subvermispora, PDB code: 6j3g:

Calcium binding site 1 out of 1 in the Crystal Structure of An Apo Form of the Glutathione S-Transferase, CSGST83044, of Ceriporiopsis Subvermispora


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of An Apo Form of the Glutathione S-Transferase, CSGST83044, of Ceriporiopsis Subvermispora within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca312 b:54.9 occ:1.00 O A:HOH610 2.2 23.6 1.0 O A:HOH675 2.3 41.9 1.0 O A:HOH424 2.4 26.7 1.0 O A:HOH582 2.6 15.4 1.0 O A:HOH543 2.7 24.7 1.0 O A:HOH419 2.9 26.0 1.0 N A:SER230 4.3 14.8 1.0 O A:HOH550 4.3 23.9 1.0 OG A:SER230 4.4 26.6 1.0 O A:HOH712 4.4 33.6 1.0 CA A:GLY229 4.5 15.5 1.0 OD2 A:ASP18 4.5 24.4 1.0 NH1 A:ARG14 4.5 25.8 1.0 O A:HOH466 4.6 20.7 1.0 OD1 A:ASP18 4.7 23.8 1.0 O A:LYS226 4.9 14.8 1.0 CB A:SER230 4.9 22.3 1.0 C2 A:EDO304 4.9 38.5 1.0 C A:GLY229 4.9 17.0 1.0 O A:LYS225 5.0 12.9 1.0

W.H.W.Osman, B.Mikami, N.Saka, K.Kondo, M.I.Lin, T.Nagata, M.Katahira. Identification of Key Residues For Activities of Atypical Glutathione S-Transferase of Ceriporiopsis Subvermispora, A Selective Degrader of Lignin in Woody Biomass, By Crystallography and Functional Mutagenesis. Int.J.Biol.Macromol. V. 132 222 2019.
ISSN: ISSN 0141-8130
PubMed: 30928378
DOI: 10.1016/J.IJBIOMAC.2019.03.199