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Calcium in PDB 6jh9: Crystal Structure of An Actin Monomer in Complex with A Chimeric Peptide of Cordon-Bleu WH2 Mutant and Mim. LYS18ARG

Protein crystallography data

The structure of Crystal Structure of An Actin Monomer in Complex with A Chimeric Peptide of Cordon-Bleu WH2 Mutant and Mim. LYS18ARG, PDB code: 6jh9 was solved by C.P.M.Scipion, R.C.Robinson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.74 / 1.74
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 195.350, 56.368, 38.478, 90.00, 93.66, 90.00
R / Rfree (%) 18.4 / 20.6

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of An Actin Monomer in Complex with A Chimeric Peptide of Cordon-Bleu WH2 Mutant and Mim. LYS18ARG (pdb code 6jh9). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of An Actin Monomer in Complex with A Chimeric Peptide of Cordon-Bleu WH2 Mutant and Mim. LYS18ARG, PDB code: 6jh9:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 6jh9

Go back to Calcium Binding Sites List in 6jh9
Calcium binding site 1 out of 2 in the Crystal Structure of An Actin Monomer in Complex with A Chimeric Peptide of Cordon-Bleu WH2 Mutant and Mim. LYS18ARG


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of An Actin Monomer in Complex with A Chimeric Peptide of Cordon-Bleu WH2 Mutant and Mim. LYS18ARG within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca402

b:23.1
occ:1.00
O1B A:ATP401 2.3 18.7 1.0
O2G A:ATP401 2.3 20.2 1.0
O A:HOH550 2.4 21.3 1.0
O A:HOH564 2.4 20.8 1.0
O A:HOH629 2.5 24.4 1.0
O A:HOH556 2.5 21.3 1.0
O A:HOH553 2.7 23.3 1.0
PG A:ATP401 3.5 22.7 1.0
PB A:ATP401 3.6 21.9 1.0
O3G A:ATP401 3.8 22.1 1.0
O3B A:ATP401 3.9 20.8 1.0
O A:HOH625 4.1 22.1 1.0
OE1 A:GLN137 4.1 24.0 1.0
O3A A:ATP401 4.2 21.4 1.0
CA A:GLY13 4.3 21.8 1.0
O1A A:ATP401 4.3 21.9 1.0
O A:HOH555 4.4 28.6 1.0
CD A:GLN137 4.4 24.2 1.0
NZ A:LYS18 4.5 18.8 1.0
OD2 A:ASP154 4.6 25.2 1.0
O A:HOH575 4.7 33.8 1.0
OD1 A:ASP11 4.7 20.5 1.0
PA A:ATP401 4.7 22.7 1.0
O1G A:ATP401 4.8 20.9 1.0
OD2 A:ASP11 4.8 22.0 1.0
O2B A:ATP401 4.8 23.1 1.0
NE2 A:GLN137 4.9 19.5 1.0
CG A:GLN137 4.9 23.0 1.0
OD1 A:ASP154 5.0 27.4 1.0

Calcium binding site 2 out of 2 in 6jh9

Go back to Calcium Binding Sites List in 6jh9
Calcium binding site 2 out of 2 in the Crystal Structure of An Actin Monomer in Complex with A Chimeric Peptide of Cordon-Bleu WH2 Mutant and Mim. LYS18ARG


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of An Actin Monomer in Complex with A Chimeric Peptide of Cordon-Bleu WH2 Mutant and Mim. LYS18ARG within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca403

b:53.8
occ:1.00
O A:HOH609 2.3 37.6 1.0
O A:HOH561 2.3 24.1 1.0
OE1 A:GLN263 2.4 24.8 1.0
OG A:SER265 2.4 28.3 1.0
O A:HOH782 2.5 36.0 1.0
O A:HOH738 2.6 28.8 1.0
CD A:GLN263 3.4 29.2 1.0
CB A:SER265 3.4 20.0 1.0
NE2 A:GLN263 3.7 30.9 1.0
N A:SER265 4.0 22.0 1.0
CA A:SER265 4.3 24.9 1.0
OE2 A:GLU270 4.3 52.7 1.0
O A:HOH699 4.5 38.4 1.0
O A:MET269 4.5 26.8 1.0
O A:SER271 4.6 27.4 1.0
O A:HOH787 4.7 49.7 1.0
CG A:GLN263 4.8 18.4 1.0
CD A:PRO264 4.8 18.1 1.0
CD A:GLU270 4.8 52.6 1.0
OE1 A:GLU270 4.9 42.0 1.0
CA A:GLU270 4.9 32.9 1.0
N A:PRO264 4.9 20.3 1.0
O A:GLU270 5.0 39.9 1.0

Reference:

C.P.M.Scipion, R.C.Robinson. Design of An Actin-Severing Peptide. To Be Published.
Page generated: Tue Jul 16 09:48:38 2024

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