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Calcium in PDB 6k7x: Human Mcu-Emre Complex

Calcium Binding Sites:

The binding sites of Calcium atom in the Human Mcu-Emre Complex (pdb code 6k7x). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 6 binding sites of Calcium where determined in the Human Mcu-Emre Complex, PDB code: 6k7x:
Jump to Calcium binding site number: 1; 2; 3; 4; 5; 6;

Calcium binding site 1 out of 6 in 6k7x

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Calcium binding site 1 out of 6 in the Human Mcu-Emre Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Human Mcu-Emre Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca401

b:61.3
occ:1.00
OE2 D:GLU264 2.3 55.0 1.0
OE2 A:GLU264 2.3 54.8 1.0
OE2 B:GLU264 2.3 55.5 1.0
OE2 C:GLU264 2.5 55.9 1.0
OE1 A:GLU264 2.5 54.8 1.0
OE1 D:GLU264 2.6 55.0 1.0
OE1 C:GLU264 2.6 55.9 1.0
OE1 B:GLU264 2.7 55.5 1.0
CD A:GLU264 2.7 54.8 1.0
CD D:GLU264 2.8 55.0 1.0
CD B:GLU264 2.9 55.5 1.0
CD C:GLU264 2.9 55.9 1.0
CG A:GLU264 4.3 54.8 1.0
CG D:GLU264 4.3 55.0 1.0
CG B:GLU264 4.4 55.5 1.0
CG C:GLU264 4.4 55.9 1.0
NE1 D:TRP260 4.5 56.5 1.0
NE1 C:TRP260 4.5 55.6 1.0
NE1 B:TRP260 4.6 55.6 1.0
NE1 A:TRP260 4.8 56.9 1.0

Calcium binding site 2 out of 6 in 6k7x

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Calcium binding site 2 out of 6 in the Human Mcu-Emre Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Human Mcu-Emre Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca402

b:80.5
occ:1.00
OD1 A:ASP261 3.5 61.3 1.0
OD1 B:ASP261 3.8 59.0 1.0
OD2 B:ASP261 4.1 59.0 1.0
CG B:ASP261 4.2 59.0 1.0
OD1 D:ASP261 4.3 58.9 1.0
CG A:ASP261 4.5 61.3 1.0
OD2 A:ASP261 4.7 61.3 1.0
CG D:ASP261 5.0 58.9 1.0

Calcium binding site 3 out of 6 in 6k7x

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Calcium binding site 3 out of 6 in the Human Mcu-Emre Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Human Mcu-Emre Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca403

b:82.8
occ:1.00
OE2 A:GLU264 4.3 54.8 1.0
OE2 C:GLU264 4.4 55.9 1.0
OE2 D:GLU264 4.5 55.0 1.0
OE2 B:GLU264 4.8 55.5 1.0

Calcium binding site 4 out of 6 in 6k7x

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Calcium binding site 4 out of 6 in the Human Mcu-Emre Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Human Mcu-Emre Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Ca401

b:61.1
occ:1.00
OE2 N:GLU264 2.3 55.0 1.0
OE2 L:GLU264 2.3 54.6 1.0
OE2 M:GLU264 2.3 55.4 1.0
OE2 K:GLU264 2.5 55.9 1.0
OE1 L:GLU264 2.5 54.6 1.0
OE1 N:GLU264 2.6 55.0 1.0
OE1 K:GLU264 2.6 55.9 1.0
OE1 M:GLU264 2.7 55.4 1.0
CD L:GLU264 2.7 54.6 1.0
CD N:GLU264 2.8 55.0 1.0
CD M:GLU264 2.9 55.4 1.0
CD K:GLU264 2.9 55.9 1.0
CG L:GLU264 4.3 54.6 1.0
CG N:GLU264 4.3 55.0 1.0
CG M:GLU264 4.4 55.4 1.0
CG K:GLU264 4.4 55.9 1.0
NE1 N:TRP260 4.5 56.6 1.0
NE1 K:TRP260 4.5 55.5 1.0
NE1 M:TRP260 4.6 55.3 1.0
NE1 L:TRP260 4.8 56.9 1.0

Calcium binding site 5 out of 6 in 6k7x

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Calcium binding site 5 out of 6 in the Human Mcu-Emre Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 5 of Human Mcu-Emre Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Ca402

b:82.8
occ:1.00
OE2 L:GLU264 4.4 54.6 1.0
OE2 K:GLU264 4.4 55.9 1.0
OE2 N:GLU264 4.5 55.0 1.0
OE2 M:GLU264 4.9 55.4 1.0

Calcium binding site 6 out of 6 in 6k7x

Go back to Calcium Binding Sites List in 6k7x
Calcium binding site 6 out of 6 in the Human Mcu-Emre Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 6 of Human Mcu-Emre Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Ca401

b:80.4
occ:1.00
OD1 L:ASP261 3.6 61.4 1.0
OD1 M:ASP261 3.8 58.5 1.0
OD2 M:ASP261 4.1 58.5 1.0
CG M:ASP261 4.2 58.5 1.0
OD1 N:ASP261 4.3 58.8 1.0
CG L:ASP261 4.5 61.4 1.0
OD2 L:ASP261 4.7 61.4 1.0
CG N:ASP261 5.0 58.8 1.0

Reference:

W.Zhuo, H.Zhou, R.Guo, J.Yi, L.Zhang, L.Yu, Y.Sui, W.Zeng, P.Wang, M.Yang. Structure of Intact Human Mcu Supercomplex with the Auxiliary Micu Subunits. Protein Cell 2020.
ISSN: ESSN 1674-8018
PubMed: 32862359
DOI: 10.1007/S13238-020-00776-W
Page generated: Tue Jul 16 10:15:07 2024

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