Calcium in PDB 6kzo: Membrane Protein

The binding sites of Calcium atom in the Membrane Protein (pdb code 6kzo). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Membrane Protein, PDB code: 6kzo:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Membrane Protein


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Membrane Protein within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca2301 b:22.0 occ:1.00 OE2 A:GLU354 2.5 22.3 1.0 CD A:GLU354 3.2 22.3 1.0 OE1 A:GLU354 3.2 22.3 1.0 OD2 A:ASP1463 3.5 25.0 1.0 OE1 A:GLU923 3.6 24.7 1.0 OD1 A:ASP1779 4.1 24.0 1.0 N A:ASN1780 4.1 23.9 1.0 CD A:GLU923 4.4 24.7 1.0 O A:GLY1778 4.4 26.6 1.0 OE2 A:GLU923 4.5 24.7 1.0 CG A:ASP1463 4.5 25.0 1.0 CA A:ASP1779 4.5 24.0 1.0 CG A:GLU354 4.5 22.3 1.0 C A:ASP1779 4.8 24.0 1.0 CG A:ASP1779 4.8 24.0 1.0 CA A:ASN1780 4.8 23.9 1.0 OD1 A:ASP924 4.8 25.9 1.0 CB A:ASP1463 4.9 25.0 1.0 N A:ASP924 5.0 25.9 1.0

Calcium binding site 2 out of 2 in the Membrane Protein


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Membrane Protein within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca2302 b:43.3 occ:1.00 OE1 A:GLU354 3.3 22.3 1.0 O A:GLY1778 3.8 26.6 1.0 N A:3PE2308 3.9 20.0 1.0 O A:LEU353 4.1 20.2 1.0 C12 A:3PE2308 4.4 20.0 1.0 OE1 A:GLN922 4.5 24.7 1.0 CD A:GLU354 4.6 22.3 1.0 O A:GLN922 4.7 24.7 1.0 O A:THR352 4.7 21.2 1.0 CB A:GLN922 4.8 24.7 1.0 C A:LEU353 4.8 20.2 1.0 C A:GLY1778 4.9 26.6 1.0 CB A:GLU354 4.9 22.3 1.0

Y.Zhao, G.Huang, Q.Wu, K.Wu, R.Li, J.Lei, X.Pan, N.Yan. Cryo-Em Structures of Apo and Antagonist-Bound Human CAV3.1. Nature V. 576 492 2019.
ISSN: ESSN 1476-4687
PubMed: 31766050
DOI: 10.1038/S41586-019-1801-3