Calcium in PDB 6kzp: Calcium Channel-Ligand

The structure of Calcium Channel-Ligand also contains other interesting chemical elements:

Fluorine	(F)	1 atom
Chlorine	(Cl)	1 atom

The binding sites of Calcium atom in the Calcium Channel-Ligand (pdb code 6kzp). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Calcium Channel-Ligand, PDB code: 6kzp:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Calcium Channel-Ligand


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Calcium Channel-Ligand within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca2301 b:19.4 occ:1.00 OE1 A:GLU923 2.6 17.6 1.0 OD1 A:ASP1463 2.8 17.6 1.0 OE1 A:GLU354 2.8 16.9 1.0 CA A:CA2302 3.0 22.5 1.0 OE2 A:GLU354 3.0 16.9 1.0 CD A:GLU354 3.3 16.9 1.0 CD A:GLU923 3.5 17.6 1.0 CG A:ASP1463 3.6 17.6 1.0 OE2 A:GLU923 3.7 17.6 1.0 O A:GLY1778 4.1 17.8 1.0 OD2 A:ASP1463 4.3 17.6 1.0 CA A:ASP1463 4.4 17.6 1.0 CB A:ASP1463 4.4 17.6 1.0 N A:ASN1780 4.5 16.5 1.0 OD1 A:ASP1779 4.5 17.6 1.0 O A:GLN922 4.7 17.7 1.0 CA A:ASP1779 4.7 17.6 1.0 CG A:GLU354 4.7 16.9 1.0 N A:GLY1464 4.7 16.8 1.0 CA A:GLU923 4.7 17.6 1.0 CG A:GLU923 4.8 17.6 1.0 N A:ASP924 4.9 18.7 1.0

Calcium binding site 2 out of 2 in the Calcium Channel-Ligand


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Calcium Channel-Ligand within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca2302 b:22.5 occ:1.00 OE1 A:GLU354 2.9 16.9 1.0 CA A:CA2301 3.0 19.4 1.0 O A:GLN922 3.2 17.7 1.0 OE1 A:GLU923 3.5 17.6 1.0 O A:GLY1778 3.7 17.8 1.0 CD A:GLU354 4.1 16.9 1.0 O A:LYS1462 4.4 17.4 1.0 C A:GLN922 4.4 17.7 1.0 OD1 A:ASP1463 4.5 17.6 1.0 CA A:ASP1463 4.6 17.6 1.0 CG A:ASP1463 4.7 17.6 1.0 OE2 A:GLU354 4.7 16.9 1.0 CB A:ASP1463 4.7 17.6 1.0 CD A:GLU923 4.7 17.6 1.0 C A:GLY1778 4.8 17.8 1.0 O A:LEU353 4.8 16.3 1.0 CA A:GLU923 4.8 17.6 1.0 C A:LYS1462 4.8 17.4 1.0 N A:ASP1463 4.9 17.6 1.0 CB A:GLU923 5.0 17.6 1.0

Y.Zhao, G.Huang, Q.Wu, K.Wu, R.Li, J.Lei, X.Pan, N.Yan. Cryo-Em Structures of Apo and Antagonist-Bound Human CAV3.1. Nature V. 576 492 2019.
ISSN: ESSN 1476-4687
PubMed: 31766050
DOI: 10.1038/S41586-019-1801-3