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Calcium in PDB 6lf7: Crystal Structure of the Complex of Goat Lactoperoxidase with Hypothiocyanite and Hydrogen Peroxide at 1.79 A Resolution.

Enzymatic activity of Crystal Structure of the Complex of Goat Lactoperoxidase with Hypothiocyanite and Hydrogen Peroxide at 1.79 A Resolution.

All present enzymatic activity of Crystal Structure of the Complex of Goat Lactoperoxidase with Hypothiocyanite and Hydrogen Peroxide at 1.79 A Resolution.:
1.11.1.7;

Protein crystallography data

The structure of Crystal Structure of the Complex of Goat Lactoperoxidase with Hypothiocyanite and Hydrogen Peroxide at 1.79 A Resolution., PDB code: 6lf7 was solved by V.Viswanathan, T.K.Tyagi, R.P.Singh, A.K.Singh, A.Singh, A.Bhushan, M.Sinha, P.Kaur, S.Sharma, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.21 / 1.79
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 53.881, 80.731, 75.139, 90.00, 101.53, 90.00
R / Rfree (%) 23.1 / 29.7

Other elements in 6lf7:

The structure of Crystal Structure of the Complex of Goat Lactoperoxidase with Hypothiocyanite and Hydrogen Peroxide at 1.79 A Resolution. also contains other interesting chemical elements:

Iodine (I) 12 atoms
Iron (Fe) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the Complex of Goat Lactoperoxidase with Hypothiocyanite and Hydrogen Peroxide at 1.79 A Resolution. (pdb code 6lf7). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of the Complex of Goat Lactoperoxidase with Hypothiocyanite and Hydrogen Peroxide at 1.79 A Resolution., PDB code: 6lf7:

Calcium binding site 1 out of 1 in 6lf7

Go back to Calcium Binding Sites List in 6lf7
Calcium binding site 1 out of 1 in the Crystal Structure of the Complex of Goat Lactoperoxidase with Hypothiocyanite and Hydrogen Peroxide at 1.79 A Resolution.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Complex of Goat Lactoperoxidase with Hypothiocyanite and Hydrogen Peroxide at 1.79 A Resolution. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca605

b:21.8
occ:1.00
 O A:ASP110 2.2 21.5 1.0
O A:PHE186 2.2 20.3 1.0
OG A:SER190 2.2 26.3 1.0
OD1 A:ASP110 2.4 23.7 1.0
OD1 A:ASP188 2.4 25.9 1.0
O A:THR184 2.4 21.1 1.0
OG1 A:THR184 2.5 22.3 1.0
C A:ASP110 3.3 20.9 1.0
CG A:ASP188 3.3 26.7 1.0
C A:THR184 3.4 21.6 1.0
CB A:SER190 3.4 24.7 1.0
CG A:ASP110 3.5 26.2 1.0
C A:PHE186 3.6 20.3 1.0
CB A:THR184 3.7 21.7 1.0
OD2 A:ASP188 3.8 26.5 1.0
CA A:THR184 3.9 19.2 1.0
N A:THR184 4.0 21.2 1.0
CA A:ASP110 4.0 21.9 1.0
N A:PHE186 4.2 22.9 1.0
N A:ASP188 4.2 25.6 1.0
N A:LEU111 4.3 19.6 1.0
CB A:ASP110 4.3 22.3 1.0
N A:SER190 4.3 23.5 1.0
N A:SER185 4.4 21.7 1.0
CA A:SER190 4.5 22.8 1.0
CA A:PHE186 4.5 23.1 1.0
CA A:LEU111 4.5 19.0 1.0
OD2 A:ASP110 4.5 29.6 1.0
CB A:ASP188 4.5 26.3 1.0
N A:LEU187 4.5 21.6 1.0
C A:SER185 4.5 22.5 1.0
O A:HOH873 4.6 17.0 1.0
CA A:LEU187 4.7 21.5 1.0
CG2 A:THR184 4.7 23.3 1.0
CA A:ASP188 4.8 24.4 1.0
CD2 A:LEU111 4.8 20.6 1.0
CG2 A:VAL183 4.9 20.5 1.0
CA A:SER185 4.9 20.4 1.0
C A:LEU187 5.0 22.5 1.0
C A:VAL183 5.0 19.3 1.0

Reference:

V.Viswanathan, T.K.Tyagi, R.P.Singh, A.K.Singh, A.Singh, A.Bhushan, M.Sinha, P.Kaur, S.Sharma, T.P.Singh. Crystal Structure of the Complex of Goat Lactoperoxidase with Hypothiocyanite and Hydrogen Peroxide at 1.79 A Resolution. To Be Published.
Page generated: Tue Jul 16 10:50:39 2024

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