Calcium in PDB 6lid: Heteromeric Amino Acid Transporter B0,+at-Rbat Complex

The binding sites of Calcium atom in the Heteromeric Amino Acid Transporter B0,+at-Rbat Complex (pdb code 6lid). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Heteromeric Amino Acid Transporter B0,+at-Rbat Complex, PDB code: 6lid:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Heteromeric Amino Acid Transporter B0,+at-Rbat Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Heteromeric Amino Acid Transporter B0,+at-Rbat Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca711 b:32.0 occ:1.00 O A:PHE318 2.5 38.5 1.0 O A:HOH859 2.5 37.4 1.0 O A:HOH837 2.6 39.8 1.0 OE1 A:GLU321 2.6 39.8 1.0 OD1 A:ASN214 2.7 38.1 1.0 O A:LEU319 2.8 38.4 1.0 C A:LEU319 3.4 38.4 1.0 CD A:GLU321 3.5 39.8 1.0 C A:PHE318 3.6 38.5 1.0 CG A:ASP284 3.7 38.2 1.0 CA A:LEU319 3.7 38.4 1.0 CG A:ASN214 3.8 38.1 1.0 OE2 A:GLU321 3.8 39.8 1.0 OD1 A:ASP284 3.8 38.2 1.0 CB A:ASP284 3.9 38.2 1.0 OD2 A:ASP284 4.0 38.2 1.0 N A:LEU319 4.2 38.4 1.0 O A:HOH856 4.2 39.5 1.0 ND2 A:ASN214 4.2 38.1 1.0 O A:LEU285 4.3 39.1 1.0 N A:LEU320 4.4 38.6 1.0 O A:ASN214 4.4 38.1 1.0 CG A:GLN277 4.5 36.9 1.0 CA A:PHE318 4.9 38.5 1.0 NE2 A:GLN277 4.9 36.9 1.0 CG A:GLU321 4.9 39.8 1.0 CA A:LEU320 4.9 38.6 1.0 CB A:PHE318 5.0 38.5 1.0 CE2 A:PHE275 5.0 36.4 1.0 CA A:ASP284 5.0 38.2 1.0

Calcium binding site 2 out of 2 in the Heteromeric Amino Acid Transporter B0,+at-Rbat Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Heteromeric Amino Acid Transporter B0,+at-Rbat Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Ca711 b:32.4 occ:1.00 O C:PHE318 2.5 38.6 1.0 O C:HOH859 2.5 37.4 1.0 O C:HOH837 2.6 39.5 1.0 OE1 C:GLU321 2.6 39.9 1.0 OD1 C:ASN214 2.7 38.1 1.0 O C:LEU319 2.8 38.3 1.0 C C:LEU319 3.4 38.3 1.0 CD C:GLU321 3.6 39.9 1.0 C C:PHE318 3.6 38.6 1.0 CG C:ASP284 3.7 38.2 1.0 CA C:LEU319 3.7 38.3 1.0 CG C:ASN214 3.8 38.1 1.0 OE2 C:GLU321 3.8 39.9 1.0 OD1 C:ASP284 3.8 38.2 1.0 CB C:ASP284 3.9 38.2 1.0 OD2 C:ASP284 4.0 38.2 1.0 N C:LEU319 4.2 38.3 1.0 ND2 C:ASN214 4.2 38.1 1.0 O C:HOH856 4.2 39.3 1.0 O C:LEU285 4.3 39.1 1.0 N C:LEU320 4.4 38.5 1.0 O C:ASN214 4.4 38.1 1.0 CG C:GLN277 4.5 37.1 1.0 CA C:PHE318 4.9 38.6 1.0 NE2 C:GLN277 4.9 37.1 1.0 CG C:GLU321 4.9 39.9 1.0 CA C:LEU320 4.9 38.5 1.0 CB C:PHE318 5.0 38.6 1.0 CE2 C:PHE275 5.0 36.4 1.0 CA C:ASP284 5.0 38.2 1.0

R.H.Yan, Y.N.Li, Y.Shi, J.Y.Zhou, J.L.Lei, J.Huang, Q.Zhou. Cryo-Em Structure of the Human Heteromeric Amino Acid Transporter B0,+at-Rbat Sci Adv V. 6 2020.
ISSN: ESSN 2375-2548
DOI: 10.1126/SCIADV.AAY6379