Calcium in PDB 6lzw: W513A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi Co-Crystalized with Chitobiose.

The structure of W513A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi Co-Crystalized with Chitobiose., PDB code: 6lzw was solved by Y.Kitaoku, P.Ubonbal, L.T.Tran, R.C.Robinson, W.Suginta, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	26.89 / 1.90
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	61.681, 57.113, 81.515, 90, 101.7, 90
R / Rfree (%)	22.7 / 29

The structure of W513A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi Co-Crystalized with Chitobiose. also contains other interesting chemical elements:

Chlorine	(Cl)	1 atom
Magnesium	(Mg)	1 atom

The binding sites of Calcium atom in the W513A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi Co-Crystalized with Chitobiose. (pdb code 6lzw). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the W513A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi Co-Crystalized with Chitobiose., PDB code: 6lzw:

Calcium binding site 1 out of 1 in the W513A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi Co-Crystalized with Chitobiose.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of W513A Mutant of Chitin-Specific Solute Binding Protein From Vibrio Harveyi Co-Crystalized with Chitobiose. within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca602 b:25.3 occ:1.00 O A:PHE344 2.2 20.0 1.0 OD1 A:ASN340 2.3 25.1 1.0 OD1 A:ASP346 2.3 25.1 1.0 OD1 A:ASP338 2.4 19.9 1.0 OD2 A:ASP346 2.5 23.4 1.0 OD1 A:ASP342 2.6 25.8 1.0 CG A:ASP346 2.7 24.1 1.0 CG A:ASN340 3.4 29.7 1.0 C A:PHE344 3.4 27.9 1.0 CG A:ASP342 3.5 24.5 1.0 CG A:ASP338 3.5 26.1 1.0 OD2 A:ASP342 3.8 29.3 1.0 ND2 A:ASN340 4.1 31.8 1.0 OG A:SER352 4.1 32.2 1.0 CA A:ASP338 4.1 22.2 1.0 N A:ASN340 4.1 20.3 1.0 CB A:ASP338 4.1 23.7 1.0 N A:PHE344 4.2 24.9 1.0 CA A:PHE344 4.2 24.7 1.0 CB A:ASP346 4.2 23.1 1.0 N A:VAL339 4.3 23.8 1.0 C A:VAL345 4.3 22.0 1.0 N A:ASP346 4.3 23.5 1.0 O A:HOH746 4.3 19.6 1.0 CB A:PHE344 4.4 23.6 1.0 OD2 A:ASP338 4.4 23.7 1.0 N A:VAL345 4.5 23.6 1.0 C A:ASP338 4.5 21.5 1.0 O A:VAL345 4.5 20.4 1.0 CB A:ASN340 4.6 24.1 1.0 N A:ASP342 4.6 26.2 1.0 CA A:VAL345 4.7 20.0 1.0 CA A:ASN340 4.7 23.9 1.0 CB A:ASP342 4.7 26.0 1.0 CA A:ASP346 4.7 20.3 1.0 C A:ASN340 4.8 25.7 1.0 N A:LYS341 4.9 24.9 1.0 N A:GLY343 5.0 28.6 1.0

Y.Kitaoku, P.Ubonbal, L.T.Tran, R.C.Robinson, W.Suginta. Structural Insight Into Chitin-Specific Solute-Binding Protein From Vibrio Harveyi To Be Published.