Calcium in PDB 6mj2: Human TRPM2 Ion Channel in A Calcium- and Adpr-Bound State

The binding sites of Calcium atom in the Human TRPM2 Ion Channel in A Calcium- and Adpr-Bound State (pdb code 6mj2). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the Human TRPM2 Ion Channel in A Calcium- and Adpr-Bound State, PDB code: 6mj2:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in the Human TRPM2 Ion Channel in A Calcium- and Adpr-Bound State


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Human TRPM2 Ion Channel in A Calcium- and Adpr-Bound State within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1601 b:1.0 occ:1.00 OE1 A:GLN846 2.6 1.0 1.0 OE2 A:GLU843 2.9 0.6 1.0 NE2 A:GLN846 2.9 1.0 1.0 OE2 A:GLU1073 3.1 0.9 1.0 CD A:GLN846 3.1 1.0 1.0 OE1 A:GLU843 3.1 0.6 1.0 OD1 A:ASN869 3.3 0.9 1.0 CD A:GLU843 3.4 0.6 1.0 OH A:TYR863 4.3 0.8 1.0 CD A:GLU1073 4.3 0.9 1.0 OH A:TYR1074 4.4 0.4 1.0 CG A:ASN869 4.4 0.9 1.0 OD2 A:ASP872 4.4 0.7 1.0 CE1 A:TYR863 4.5 0.8 1.0 CG A:GLN846 4.6 1.0 1.0 ND2 A:ASN869 4.7 0.9 1.0 CZ A:TYR863 4.9 0.8 1.0 CG A:GLU843 4.9 0.6 1.0 OE1 A:GLU1073 5.0 0.9 1.0

Calcium binding site 2 out of 4 in the Human TRPM2 Ion Channel in A Calcium- and Adpr-Bound State


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Human TRPM2 Ion Channel in A Calcium- and Adpr-Bound State within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca1601 b:0.2 occ:1.01 OE1 B:GLN846 2.6 0.3 1.0 NE2 B:GLN846 2.8 0.3 1.0 CD B:GLN846 3.0 0.3 1.0 OE2 B:GLU1073 3.1 0.5 1.0 OE2 B:GLU843 3.1 0.4 1.0 OE1 B:GLU843 3.1 0.4 1.0 OD1 B:ASN869 3.2 0.3 1.0 CD B:GLU843 3.5 0.4 1.0 OH B:TYR863 4.1 0.9 1.0 CG B:ASN869 4.2 0.3 1.0 CE1 B:TYR863 4.3 0.9 1.0 CD B:GLU1073 4.3 0.5 1.0 OD2 B:ASP872 4.5 0.6 1.0 ND2 B:ASN869 4.5 0.3 1.0 CG B:GLN846 4.5 0.3 1.0 OH B:TYR1074 4.6 0.1 1.0 CZ B:TYR863 4.7 0.9 1.0 OE1 B:GLU1073 4.9 0.5 1.0

Calcium binding site 3 out of 4 in the Human TRPM2 Ion Channel in A Calcium- and Adpr-Bound State


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Human TRPM2 Ion Channel in A Calcium- and Adpr-Bound State within 5.0Å range: probe atom residue distance (Å) B Occ C:Ca1601 b:0.9 occ:1.01 OE1 C:GLN846 2.5 0.4 1.0 NE2 C:GLN846 2.7 0.4 1.0 CD C:GLN846 2.9 0.4 1.0 OE2 C:GLU1073 3.0 0.9 1.0 OE2 C:GLU843 3.1 0.4 1.0 OE1 C:GLU843 3.1 0.4 1.0 OD1 C:ASN869 3.3 0.5 1.0 CD C:GLU843 3.5 0.4 1.0 OH C:TYR863 4.2 1.0 1.0 CD C:GLU1073 4.2 0.9 1.0 CG C:ASN869 4.3 0.5 1.0 CE1 C:TYR863 4.3 1.0 1.0 CG C:GLN846 4.4 0.4 1.0 OD2 C:ASP872 4.6 0.0 1.0 ND2 C:ASN869 4.6 0.5 1.0 OH C:TYR1074 4.6 1.0 1.0 CZ C:TYR863 4.8 1.0 1.0 OE1 C:GLU1073 4.9 0.9 1.0

Calcium binding site 4 out of 4 in the Human TRPM2 Ion Channel in A Calcium- and Adpr-Bound State


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Human TRPM2 Ion Channel in A Calcium- and Adpr-Bound State within 5.0Å range: probe atom residue distance (Å) B Occ D:Ca1601 b:1.0 occ:1.01 OE1 D:GLN846 2.6 0.6 1.0 NE2 D:GLN846 2.9 0.6 1.0 OE2 D:GLU843 3.0 0.9 1.0 OE2 D:GLU1073 3.0 0.1 1.0 CD D:GLN846 3.1 0.6 1.0 OE1 D:GLU843 3.2 0.9 1.0 OD1 D:ASN869 3.3 0.9 1.0 CD D:GLU843 3.5 0.9 1.0 OH D:TYR863 4.2 0.7 1.0 CD D:GLU1073 4.3 0.1 1.0 CG D:ASN869 4.3 0.9 1.0 OD2 D:ASP872 4.4 0.8 1.0 OH D:TYR1074 4.4 0.1 1.0 CE1 D:TYR863 4.5 0.7 1.0 CG D:GLN846 4.6 0.6 1.0 ND2 D:ASN869 4.7 0.9 1.0 CZ D:TYR863 4.9 0.7 1.0 OE1 D:GLU1073 4.9 0.1 1.0 CG D:GLU843 5.0 0.9 1.0

L.Wang, T.M.Fu, Y.Zhou, S.Xia, A.Greka, H.Wu. Structures and Gating Mechanism of Human TRPM2. Science V. 362 2018.
ISSN: ESSN 1095-9203
PubMed: 30467180
DOI: 10.1126/SCIENCE.AAV4809