Calcium in PDB 6n4u: Microed Structure of Proteinase K at 2.75A Resolution From A Single Milled Crystal.

Enzymatic activity of Microed Structure of Proteinase K at 2.75A Resolution From A Single Milled Crystal.

All present enzymatic activity of Microed Structure of Proteinase K at 2.75A Resolution From A Single Milled Crystal.:
3.4.21.64;

Calcium Binding Sites:

The binding sites of Calcium atom in the Microed Structure of Proteinase K at 2.75A Resolution From A Single Milled Crystal. (pdb code 6n4u). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Microed Structure of Proteinase K at 2.75A Resolution From A Single Milled Crystal., PDB code: 6n4u:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 6n4u

Go back to Calcium Binding Sites List in 6n4u
Calcium binding site 1 out of 2 in the Microed Structure of Proteinase K at 2.75A Resolution From A Single Milled Crystal.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Microed Structure of Proteinase K at 2.75A Resolution From A Single Milled Crystal. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca301

b:26.9
occ:1.00
ND1 A:HIS69 2.5 22.8 1.0
CB A:CYS73 2.6 21.9 1.0
O A:HIS69 2.6 21.9 1.0
CE A:MET225 2.7 22.2 1.0
CE1 A:HIS69 2.9 23.1 1.0
OD2 A:ASP39 3.0 24.6 1.0
SG A:CYS73 3.2 41.7 1.0
C A:HIS69 3.4 21.5 1.0
N A:CYS73 3.5 19.5 1.0
CA A:CYS73 3.6 20.1 1.0
CG A:HIS69 3.7 22.2 1.0
CG A:ASP39 3.8 24.4 1.0
O A:SER224 4.1 21.7 1.0
SD A:MET225 4.1 22.2 1.0
NE2 A:HIS69 4.2 23.9 1.0
OD1 A:ASP39 4.2 22.9 1.0
CA A:HIS69 4.2 21.2 1.0
N A:GLY70 4.2 22.3 1.0
CA A:GLY70 4.3 22.4 1.0
CB A:HIS69 4.4 21.2 1.0
CD2 A:HIS69 4.5 22.8 1.0
CB A:SER132 4.6 23.2 1.0
C A:HIS72 4.7 20.6 1.0
CB A:HIS72 4.8 19.4 1.0
C A:GLY70 4.8 22.0 1.0
C A:SER224 4.9 21.4 1.0
O A:GLY70 4.9 22.1 1.0
CB A:ASP39 4.9 22.6 1.0
C A:CYS73 4.9 19.7 1.0
CB A:SER224 5.0 22.5 1.0

Calcium binding site 2 out of 2 in 6n4u

Go back to Calcium Binding Sites List in 6n4u
Calcium binding site 2 out of 2 in the Microed Structure of Proteinase K at 2.75A Resolution From A Single Milled Crystal.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Microed Structure of Proteinase K at 2.75A Resolution From A Single Milled Crystal. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca302

b:29.4
occ:1.00
N A:ASN270 3.0 21.3 1.0
CA A:ASN270 3.7 21.1 1.0
CB A:ASN270 3.7 21.1 1.0
O A:ASN270 3.9 20.8 1.0
C A:ASN270 3.9 20.9 1.0
C A:VAL269 4.0 20.7 1.0
CA A:VAL269 4.0 21.4 1.0
CG A:LEU271 4.3 21.8 1.0
CB A:VAL269 4.4 21.8 1.0
N A:LEU271 4.7 20.6 1.0
CD1 A:LEU271 4.8 23.2 1.0
CD2 A:LEU271 4.8 20.8 1.0
CG1 A:VAL269 5.0 22.5 1.0

Reference:

M.W.Martynowycz, W.Zhao, J.Hattne, G.J.Jensen, T.Gonen. Collection of Continuous Rotation Microed Data From Ion Beam-Milled Crystals of Any Size. Structure V. 27 545 2019.
ISSN: ISSN 1878-4186
PubMed: 30661853
DOI: 10.1016/J.STR.2018.12.003
Page generated: Sat Dec 12 07:22:24 2020

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