Calcium in PDB 6n6b: The Complex Crystal Structure of Neuraminidase From A/Minnesota/11/2010 with B10 Antibody.

Enzymatic activity of The Complex Crystal Structure of Neuraminidase From A/Minnesota/11/2010 with B10 Antibody.

All present enzymatic activity of The Complex Crystal Structure of Neuraminidase From A/Minnesota/11/2010 with B10 Antibody.:
3.2.1.18;

Protein crystallography data

The structure of The Complex Crystal Structure of Neuraminidase From A/Minnesota/11/2010 with B10 Antibody., PDB code: 6n6b was solved by H.Yang, J.Stevens, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.30
Space group I 4
Cell size a, b, c (Å), α, β, γ (°) 188.471, 188.471, 136.602, 90.00, 90.00, 90.00
R / Rfree (%) 22 / 24.5

Calcium Binding Sites:

The binding sites of Calcium atom in the The Complex Crystal Structure of Neuraminidase From A/Minnesota/11/2010 with B10 Antibody. (pdb code 6n6b). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the The Complex Crystal Structure of Neuraminidase From A/Minnesota/11/2010 with B10 Antibody., PDB code: 6n6b:

Calcium binding site 1 out of 1 in 6n6b

Go back to Calcium Binding Sites List in 6n6b
Calcium binding site 1 out of 1 in the The Complex Crystal Structure of Neuraminidase From A/Minnesota/11/2010 with B10 Antibody.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The Complex Crystal Structure of Neuraminidase From A/Minnesota/11/2010 with B10 Antibody. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca501

b:25.5
occ:1.00
O A:HOH682 2.1 30.0 1.0
O A:ASP293 2.3 18.8 1.0
OD2 A:ASP324 2.3 24.9 1.0
O A:GLY297 2.3 28.4 1.0
O A:HIS347 2.3 22.4 1.0
O A:GLY345 2.4 22.1 1.0
C A:GLY345 3.5 23.6 1.0
C A:GLY297 3.5 28.6 1.0
CG A:ASP324 3.5 24.0 1.0
C A:ASP293 3.5 18.9 1.0
C A:HIS347 3.5 21.9 1.0
CA A:GLY348 4.0 20.6 1.0
O A:HOH686 4.0 30.0 1.0
O A:GLY346 4.1 25.7 1.0
CA A:GLY345 4.1 22.9 1.0
CA A:ASN294 4.1 20.2 1.0
N A:GLY348 4.2 21.9 1.0
N A:SER298 4.2 25.3 1.0
C A:GLY346 4.2 23.5 1.0
N A:ASN294 4.3 19.1 1.0
CA A:SER298 4.3 21.9 1.0
CB A:ASP324 4.3 23.3 1.0
OD1 A:ASP324 4.3 25.2 1.0
N A:GLY346 4.5 23.0 1.0
C A:ASN294 4.5 21.3 1.0
N A:HIS347 4.5 20.8 1.0
N A:GLY297 4.6 22.4 1.0
CA A:GLY297 4.6 25.1 1.0
O A:LYS344 4.6 28.5 1.0
CA A:ASP293 4.6 19.2 1.0
CA A:HIS347 4.7 22.2 1.0
OD1 A:ASP293 4.7 17.9 1.0
N A:TRP295 4.7 22.3 1.0
CA A:GLY346 4.8 25.0 1.0
CB A:ASP293 4.8 19.7 1.0
N A:ASP293 4.8 20.6 1.0
O A:ASN294 4.9 19.0 1.0
O A:PRO326 5.0 25.6 1.0

Reference:

H.Wan, J.Gao, H.Yang, S.Yang, R.Harvey, Y.Q.Chen, N.Y.Zheng, J.Chang, P.J.Carney, X.Li, E.Plant, L.Jiang, L.Couzens, C.Wang, S.Strohmeier, W.W.Wu, R.F.Shen, F.Krammer, J.F.Cipollo, P.C.Wilson, J.Stevens, X.F.Wan, M.C.Eichelberger, Z.Ye. The Neuraminidase of A(H3N2) Influenza Viruses Circulating Since 2016 Is Antigenically Distinct From the A/Hong Kong/4801/2014 Vaccine Strain. Nat Microbiol 2019.
ISSN: ESSN 2058-5276
PubMed: 31406333
DOI: 10.1038/S41564-019-0522-6
Page generated: Sat Dec 12 07:22:32 2020

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