Calcium in PDB 6o9n: Structural Insights on A New Fungal Aryl-Alcohol Oxidase

All present enzymatic activity of Structural Insights on A New Fungal Aryl-Alcohol Oxidase:
1.1.3.7;

The structure of Structural Insights on A New Fungal Aryl-Alcohol Oxidase, PDB code: 6o9n was solved by M.A.S.Kadowaki, I.Polikarpov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	98.19 / 2.60
Space group	P 2 21 21
Cell size a, b, c (Å), α, β, γ (°)	63.854, 109.696, 220.258, 90.00, 90.00, 90.00
R / Rfree (%)	19.4 / 25.1

The binding sites of Calcium atom in the Structural Insights on A New Fungal Aryl-Alcohol Oxidase (pdb code 6o9n). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Structural Insights on A New Fungal Aryl-Alcohol Oxidase, PDB code: 6o9n:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Structural Insights on A New Fungal Aryl-Alcohol Oxidase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structural Insights on A New Fungal Aryl-Alcohol Oxidase within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca710 b:19.0 occ:1.00 O A:TYR400 2.2 20.3 1.0 OD1 A:ASP79 2.3 29.2 1.0 O A:LEU402 2.3 25.0 1.0 O A:PHE78 2.4 26.4 1.0 O A:THR77 2.4 23.3 1.0 O A:HOH827 2.4 18.4 1.0 C A:PHE78 3.2 22.1 1.0 C A:TYR400 3.3 19.1 1.0 C A:LEU402 3.4 25.9 1.0 CG A:ASP79 3.5 24.5 1.0 C A:THR77 3.6 18.7 1.0 N A:ASP79 3.8 19.1 1.0 CA A:TYR400 4.0 19.4 1.0 CA A:PHE78 4.1 19.9 1.0 C A:THR401 4.1 22.0 1.0 N A:LEU402 4.1 18.9 1.0 CA A:ASP79 4.1 22.3 1.0 N A:ALA403 4.1 21.3 1.0 CA A:ALA403 4.1 21.8 1.0 CB A:PHE78 4.2 21.6 1.0 N A:PHE78 4.3 21.9 1.0 N A:THR401 4.3 19.2 1.0 OD2 A:ASP79 4.4 21.7 1.0 O A:HOH828 4.4 19.1 1.0 CA A:LEU402 4.4 18.8 1.0 O A:THR401 4.4 25.0 1.0 CB A:ASP79 4.4 18.9 1.0 CA A:THR401 4.5 20.4 1.0 CB A:TYR400 4.6 19.5 1.0 CE1 A:PHE391 4.7 18.9 1.0 N A:THR77 4.7 27.2 1.0 CD2 A:PHE78 4.7 21.2 1.0 CA A:THR77 4.7 27.4 1.0 C A:GLY76 4.8 28.2 1.0 CG A:PHE78 4.8 19.3 1.0 OE1 A:GLN242 4.8 18.3 1.0 O A:ALA403 4.9 40.9 1.0

Calcium binding site 2 out of 2 in the Structural Insights on A New Fungal Aryl-Alcohol Oxidase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Structural Insights on A New Fungal Aryl-Alcohol Oxidase within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca707 b:20.4 occ:1.00 O B:TYR400 2.2 25.1 1.0 O B:HOH921 2.3 20.0 1.0 OD1 B:ASP79 2.4 42.5 1.0 O B:LEU402 2.4 20.2 1.0 O B:THR77 2.4 20.0 1.0 O B:PHE78 2.5 26.1 1.0 C B:PHE78 3.2 23.3 1.0 C B:TYR400 3.3 27.0 1.0 C B:LEU402 3.4 20.1 1.0 CG B:ASP79 3.4 26.1 1.0 C B:THR77 3.6 19.9 1.0 N B:ASP79 3.9 24.4 1.0 N B:ALA403 4.1 19.7 1.0 CA B:ALA403 4.1 19.5 1.0 CA B:TYR400 4.1 25.4 1.0 CA B:PHE78 4.1 20.4 1.0 O B:HOH809 4.1 20.0 1.0 CA B:ASP79 4.1 24.2 1.0 OD2 B:ASP79 4.1 37.9 1.0 C B:THR401 4.1 20.7 1.0 N B:LEU402 4.2 20.7 1.0 N B:PHE78 4.3 20.1 1.0 CB B:PHE78 4.3 20.3 1.0 N B:THR401 4.3 27.6 1.0 CB B:ASP79 4.4 23.5 1.0 O B:THR401 4.4 30.6 1.0 CA B:THR401 4.4 21.6 1.0 CA B:LEU402 4.4 20.3 1.0 CB B:TYR400 4.6 27.1 1.0 N B:THR77 4.7 20.3 1.0 C B:GLY76 4.7 19.8 1.0 CA B:THR77 4.7 22.4 1.0 CD2 B:PHE78 4.8 20.8 1.0 CE1 B:PHE391 4.8 21.4 1.0 O B:GLY76 4.9 20.1 1.0 OE1 B:GLN242 4.9 19.7 1.0 CG B:PHE78 4.9 22.3 1.0 O B:ALA403 5.0 30.5 1.0

M.A.S.Kadowaki, I.Polikarpov. Structural Insights on A New Fungal Aryl-Alcohol Oxidase To Be Published.