Calcium in PDB 6oen: Cryo-Em Structure of Mouse RAG1/2 Prc Complex (DNA1)

All present enzymatic activity of Cryo-Em Structure of Mouse RAG1/2 Prc Complex (DNA1):
2.3.2.27;

The structure of Cryo-Em Structure of Mouse RAG1/2 Prc Complex (DNA1) also contains other interesting chemical elements:

Zinc

(Zn)

2 atoms

The binding sites of Calcium atom in the Cryo-Em Structure of Mouse RAG1/2 Prc Complex (DNA1) (pdb code 6oen). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Cryo-Em Structure of Mouse RAG1/2 Prc Complex (DNA1), PDB code: 6oen:

Calcium binding site 1 out of 1 in the Cryo-Em Structure of Mouse RAG1/2 Prc Complex (DNA1)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cryo-Em Structure of Mouse RAG1/2 Prc Complex (DNA1) within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1102 b:86.6 occ:1.00 OD1 A:ASP600 3.0 99.9 1.0 OD2 A:ASP600 3.1 99.9 1.0 CG A:ASP600 3.5 99.9 1.0 OP2 F:DA32 3.8 0.3 1.0 O A:GLY601 4.0 0.7 1.0 OE1 A:GLU662 4.9 0.3 1.0 P F:DA32 4.9 0.3 1.0 OP1 F:DA32 5.0 0.3 1.0 CB A:ASP600 5.0 99.9 1.0

X.Chen, Y.Cui, Z.H.Zhou, W.Yang, M.Gellert. Cutting Antiparallel Dna Strands in A Single Active Site Nat.Struct.Mol.Biol. 2020.
ISSN: ESSN 1545-9985