Atomistry » Calcium » PDB 6ojh-6p8p » 6oy3
Atomistry »
  Calcium »
    PDB 6ojh-6p8p »
      6oy3 »

Calcium in PDB 6oy3: NHTMEM16 L302A +CA2+ in Nanodiscs

Calcium Binding Sites:

The binding sites of Calcium atom in the NHTMEM16 L302A +CA2+ in Nanodiscs (pdb code 6oy3). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the NHTMEM16 L302A +CA2+ in Nanodiscs, PDB code: 6oy3:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in 6oy3

Go back to Calcium Binding Sites List in 6oy3
Calcium binding site 1 out of 4 in the NHTMEM16 L302A +CA2+ in Nanodiscs


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of NHTMEM16 L302A +CA2+ in Nanodiscs within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca801

b:42.5
occ:1.00
OE1 B:GLU535 2.5 28.3 1.0
OD1 B:ASN448 2.5 24.9 1.0
OE2 B:GLU535 3.0 28.3 1.0
CD B:GLU535 3.0 28.3 1.0
OE2 B:GLU506 3.1 23.2 1.0
CA B:CA802 3.2 52.5 1.0
CG B:ASN448 3.6 24.9 1.0
OE1 B:GLU452 3.7 28.2 1.0
CD B:GLU506 3.8 23.2 1.0
CG B:GLU535 4.4 28.3 1.0
OE1 B:GLU506 4.4 23.2 1.0
CG B:GLU506 4.4 23.2 1.0
CB B:ASN448 4.5 24.9 1.0
ND2 B:ASN531 4.5 26.8 1.0
ND2 B:ASN448 4.6 24.9 1.0
CD B:GLU452 4.8 28.2 1.0

Calcium binding site 2 out of 4 in 6oy3

Go back to Calcium Binding Sites List in 6oy3
Calcium binding site 2 out of 4 in the NHTMEM16 L302A +CA2+ in Nanodiscs


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of NHTMEM16 L302A +CA2+ in Nanodiscs within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca802

b:52.5
occ:1.00
OE2 B:GLU452 2.5 28.2 1.0
OE2 B:GLU535 2.5 28.3 1.0
OE1 B:GLU452 2.6 28.2 1.0
CD B:GLU452 2.8 28.2 1.0
CA B:CA801 3.2 42.5 1.0
OD1 B:ASP503 3.3 24.5 1.0
CD B:GLU535 3.6 28.3 1.0
OD1 B:ASN448 3.9 24.9 1.0
CG B:GLU506 4.0 23.2 1.0
CD B:GLU506 4.1 23.2 1.0
CG B:GLU452 4.2 28.2 1.0
OE1 B:GLU535 4.2 28.3 1.0
CB B:GLU506 4.2 23.2 1.0
OE2 B:GLU506 4.4 23.2 1.0
CG B:ASP503 4.5 24.5 1.0
OE1 B:GLU506 4.5 23.2 1.0
CG B:GLU535 4.7 28.3 1.0
OD1 B:ASP539 4.7 27.8 1.0
CG B:ASN448 4.9 24.9 1.0
CB B:GLU452 5.0 28.2 1.0

Calcium binding site 3 out of 4 in 6oy3

Go back to Calcium Binding Sites List in 6oy3
Calcium binding site 3 out of 4 in the NHTMEM16 L302A +CA2+ in Nanodiscs


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of NHTMEM16 L302A +CA2+ in Nanodiscs within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca801

b:42.5
occ:1.00
OE1 A:GLU535 2.5 28.3 1.0
OD1 A:ASN448 2.5 24.9 1.0
OE2 A:GLU535 3.0 28.3 1.0
CD A:GLU535 3.0 28.3 1.0
OE2 A:GLU506 3.1 23.2 1.0
CA A:CA802 3.2 52.5 1.0
CG A:ASN448 3.6 24.9 1.0
OE1 A:GLU452 3.7 28.2 1.0
CD A:GLU506 3.8 23.2 1.0
CG A:GLU535 4.4 28.3 1.0
OE1 A:GLU506 4.4 23.2 1.0
CG A:GLU506 4.4 23.2 1.0
CB A:ASN448 4.5 24.9 1.0
ND2 A:ASN531 4.5 26.8 1.0
ND2 A:ASN448 4.6 24.9 1.0
CD A:GLU452 4.8 28.2 1.0

Calcium binding site 4 out of 4 in 6oy3

Go back to Calcium Binding Sites List in 6oy3
Calcium binding site 4 out of 4 in the NHTMEM16 L302A +CA2+ in Nanodiscs


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of NHTMEM16 L302A +CA2+ in Nanodiscs within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca802

b:52.5
occ:1.00
OE2 A:GLU452 2.5 28.2 1.0
OE2 A:GLU535 2.5 28.3 1.0
OE1 A:GLU452 2.6 28.2 1.0
CD A:GLU452 2.8 28.2 1.0
CA A:CA801 3.2 42.5 1.0
OD1 A:ASP503 3.3 24.5 1.0
CD A:GLU535 3.6 28.3 1.0
OD1 A:ASN448 3.9 24.9 1.0
CG A:GLU506 4.0 23.2 1.0
CD A:GLU506 4.1 23.2 1.0
CG A:GLU452 4.2 28.2 1.0
OE1 A:GLU535 4.2 28.3 1.0
CB A:GLU506 4.2 23.2 1.0
OE2 A:GLU506 4.4 23.2 1.0
CG A:ASP503 4.5 24.5 1.0
OE1 A:GLU506 4.5 23.2 1.0
CG A:GLU535 4.7 28.3 1.0
OD1 A:ASP539 4.7 27.8 1.0
CG A:ASN448 4.9 24.9 1.0
CB A:GLU452 5.0 28.2 1.0

Reference:

M.Falzone, B.Lee, A.Accardi. NHTMEM16 L302A +CA2+ in Nanodiscs To Be Published.
Page generated: Tue Jul 16 12:38:54 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy