Calcium in PDB 6psn: Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor
Enzymatic activity of Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor
All present enzymatic activity of Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor:
3.4.24.83;
Calcium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
14;
Binding sites:
The binding sites of Calcium atom in the Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor
(pdb code 6psn). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 14 binding sites of Calcium where determined in the
Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor, PDB code: 6psn:
Jump to Calcium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Calcium binding site 1 out
of 14 in 6psn
Go back to
Calcium Binding Sites List in 6psn
Calcium binding site 1 out
of 14 in the Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca801
b:0.7
occ:1.00
|
O
|
A:ILE183
|
2.1
|
0.5
|
1.0
|
OD2
|
A:ASP179
|
2.2
|
0.9
|
1.0
|
OD1
|
A:ASP179
|
2.3
|
0.9
|
1.0
|
OD1
|
A:ASP181
|
2.3
|
1.0
|
1.0
|
CG
|
A:ASP179
|
2.5
|
0.9
|
1.0
|
CG
|
A:ASP181
|
3.2
|
1.0
|
1.0
|
C
|
A:ILE183
|
3.3
|
0.5
|
1.0
|
OD2
|
A:ASP181
|
3.3
|
1.0
|
1.0
|
CG2
|
A:ILE183
|
3.6
|
0.5
|
1.0
|
OD1
|
A:ASP185
|
3.7
|
0.7
|
1.0
|
CA
|
A:CA802
|
3.7
|
0.7
|
1.0
|
O
|
A:PRO184
|
3.9
|
0.4
|
1.0
|
CB
|
A:ASP179
|
4.0
|
0.9
|
1.0
|
C
|
A:PRO184
|
4.1
|
0.4
|
1.0
|
CA
|
A:ILE183
|
4.1
|
0.5
|
1.0
|
CB
|
A:ILE183
|
4.2
|
0.5
|
1.0
|
N
|
A:ILE183
|
4.2
|
0.5
|
1.0
|
N
|
A:PRO184
|
4.3
|
0.4
|
1.0
|
O
|
A:SER222
|
4.4
|
0.2
|
1.0
|
CA
|
A:PRO184
|
4.4
|
0.4
|
1.0
|
CB
|
A:ASP177
|
4.4
|
0.9
|
1.0
|
CG1
|
A:ILE183
|
4.4
|
0.5
|
1.0
|
O
|
A:PRO223
|
4.5
|
0.6
|
1.0
|
N
|
A:ASP185
|
4.6
|
0.7
|
1.0
|
CB
|
A:ASP181
|
4.6
|
1.0
|
1.0
|
N
|
A:ASP181
|
4.7
|
1.0
|
1.0
|
CA
|
A:ASP185
|
4.7
|
0.7
|
1.0
|
CA
|
A:PRO223
|
4.7
|
0.6
|
1.0
|
CA
|
A:ASP177
|
4.8
|
0.9
|
1.0
|
N
|
A:ASP179
|
4.8
|
0.9
|
1.0
|
CA
|
A:ASP179
|
4.8
|
0.9
|
1.0
|
CB
|
A:GLU188
|
4.8
|
0.7
|
1.0
|
CG
|
A:ASP185
|
4.8
|
0.7
|
1.0
|
C
|
A:PRO223
|
4.8
|
0.6
|
1.0
|
N
|
A:ASN180
|
5.0
|
0.5
|
1.0
|
|
Calcium binding site 2 out
of 14 in 6psn
Go back to
Calcium Binding Sites List in 6psn
Calcium binding site 2 out
of 14 in the Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca802
b:0.7
occ:1.00
|
O
|
A:LYS225
|
2.2
|
0.3
|
1.0
|
O
|
A:SER222
|
2.3
|
0.2
|
1.0
|
OD2
|
A:ASP179
|
2.3
|
0.9
|
1.0
|
OD2
|
A:ASP235
|
2.3
|
0.5
|
1.0
|
OD2
|
A:ASP181
|
2.4
|
1.0
|
1.0
|
CG
|
A:ASP179
|
3.2
|
0.9
|
1.0
|
C
|
A:LYS225
|
3.3
|
0.3
|
1.0
|
CG
|
A:ASP181
|
3.5
|
1.0
|
1.0
|
C
|
A:SER222
|
3.5
|
0.2
|
1.0
|
CG
|
A:ASP235
|
3.6
|
0.5
|
1.0
|
CB
|
A:ASP179
|
3.6
|
0.9
|
1.0
|
CA
|
A:CA801
|
3.7
|
0.7
|
1.0
|
OG1
|
A:THR228
|
3.9
|
0.9
|
1.0
|
OD1
|
A:ASP181
|
3.9
|
1.0
|
1.0
|
N
|
A:LYS225
|
4.1
|
0.3
|
1.0
|
OG
|
A:SER221
|
4.1
|
0.2
|
1.0
|
N
|
A:TRP226
|
4.2
|
0.6
|
1.0
|
CA
|
A:LYS225
|
4.2
|
0.3
|
1.0
|
N
|
A:SER222
|
4.3
|
0.2
|
1.0
|
OD1
|
A:ASP179
|
4.3
|
0.9
|
1.0
|
CA
|
A:SER222
|
4.3
|
0.2
|
1.0
|
CB
|
A:ASP235
|
4.4
|
0.5
|
1.0
|
CA
|
A:TRP226
|
4.4
|
0.6
|
1.0
|
N
|
A:PRO223
|
4.4
|
0.6
|
1.0
|
OD1
|
A:ASP235
|
4.5
|
0.5
|
1.0
|
CA
|
A:PRO223
|
4.5
|
0.6
|
1.0
|
C
|
A:TRP226
|
4.5
|
0.6
|
1.0
|
C
|
A:PRO223
|
4.5
|
0.6
|
1.0
|
O
|
A:TRP226
|
4.5
|
0.6
|
1.0
|
CB
|
A:SER222
|
4.6
|
0.2
|
1.0
|
CB
|
A:ASP181
|
4.7
|
1.0
|
1.0
|
N
|
A:GLU224
|
4.7
|
0.9
|
1.0
|
CB
|
A:LYS225
|
4.7
|
0.3
|
1.0
|
CB
|
A:SER221
|
4.8
|
0.2
|
1.0
|
O
|
A:PRO223
|
4.9
|
0.6
|
1.0
|
C
|
A:GLU224
|
5.0
|
0.9
|
1.0
|
|
Calcium binding site 3 out
of 14 in 6psn
Go back to
Calcium Binding Sites List in 6psn
Calcium binding site 3 out
of 14 in the Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca801
b:0.5
occ:1.00
|
O
|
B:ILE183
|
2.1
|
0.6
|
1.0
|
OD2
|
B:ASP179
|
2.2
|
0.6
|
1.0
|
OD1
|
B:ASP179
|
2.3
|
0.6
|
1.0
|
OD1
|
B:ASP181
|
2.3
|
0.6
|
1.0
|
CG
|
B:ASP179
|
2.5
|
0.6
|
1.0
|
CG
|
B:ASP181
|
3.2
|
0.6
|
1.0
|
C
|
B:ILE183
|
3.3
|
0.6
|
1.0
|
OD2
|
B:ASP181
|
3.3
|
0.6
|
1.0
|
CG2
|
B:ILE183
|
3.6
|
0.6
|
1.0
|
OD1
|
B:ASP185
|
3.7
|
0.6
|
1.0
|
CA
|
B:CA802
|
3.7
|
0.4
|
1.0
|
O
|
B:PRO184
|
3.9
|
0.5
|
1.0
|
CB
|
B:ASP179
|
4.0
|
0.6
|
1.0
|
C
|
B:PRO184
|
4.1
|
0.5
|
1.0
|
CA
|
B:ILE183
|
4.1
|
0.6
|
1.0
|
CB
|
B:ILE183
|
4.2
|
0.6
|
1.0
|
N
|
B:ILE183
|
4.2
|
0.6
|
1.0
|
N
|
B:PRO184
|
4.3
|
0.5
|
1.0
|
O
|
B:SER222
|
4.4
|
0.1
|
1.0
|
CA
|
B:PRO184
|
4.4
|
0.5
|
1.0
|
CB
|
B:ASP177
|
4.4
|
0.2
|
1.0
|
CG1
|
B:ILE183
|
4.4
|
0.6
|
1.0
|
O
|
B:PRO223
|
4.5
|
0.9
|
1.0
|
N
|
B:ASP185
|
4.6
|
0.6
|
1.0
|
CB
|
B:ASP181
|
4.6
|
0.6
|
1.0
|
N
|
B:ASP181
|
4.7
|
0.6
|
1.0
|
CA
|
B:ASP185
|
4.7
|
0.6
|
1.0
|
CA
|
B:PRO223
|
4.7
|
0.9
|
1.0
|
CA
|
B:ASP177
|
4.8
|
0.2
|
1.0
|
N
|
B:ASP179
|
4.8
|
0.6
|
1.0
|
CA
|
B:ASP179
|
4.8
|
0.6
|
1.0
|
CB
|
B:GLU188
|
4.8
|
0.9
|
1.0
|
CG
|
B:ASP185
|
4.8
|
0.6
|
1.0
|
C
|
B:PRO223
|
4.8
|
0.9
|
1.0
|
N
|
B:ASN180
|
5.0
|
0.5
|
1.0
|
|
Calcium binding site 4 out
of 14 in 6psn
Go back to
Calcium Binding Sites List in 6psn
Calcium binding site 4 out
of 14 in the Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca802
b:0.4
occ:1.00
|
O
|
B:LYS225
|
2.2
|
0.1
|
1.0
|
O
|
B:SER222
|
2.3
|
0.1
|
1.0
|
OD2
|
B:ASP179
|
2.3
|
0.6
|
1.0
|
OD2
|
B:ASP235
|
2.3
|
0.7
|
1.0
|
OD2
|
B:ASP181
|
2.4
|
0.6
|
1.0
|
CG
|
B:ASP179
|
3.2
|
0.6
|
1.0
|
C
|
B:LYS225
|
3.3
|
0.1
|
1.0
|
CG
|
B:ASP181
|
3.5
|
0.6
|
1.0
|
C
|
B:SER222
|
3.5
|
0.1
|
1.0
|
CG
|
B:ASP235
|
3.6
|
0.7
|
1.0
|
CB
|
B:ASP179
|
3.6
|
0.6
|
1.0
|
CA
|
B:CA801
|
3.7
|
0.5
|
1.0
|
OG1
|
B:THR228
|
3.9
|
0.0
|
1.0
|
OD1
|
B:ASP181
|
3.9
|
0.6
|
1.0
|
N
|
B:LYS225
|
4.1
|
0.1
|
1.0
|
OG
|
B:SER221
|
4.1
|
0.2
|
1.0
|
N
|
B:TRP226
|
4.2
|
0.4
|
1.0
|
CA
|
B:LYS225
|
4.2
|
0.1
|
1.0
|
N
|
B:SER222
|
4.3
|
0.1
|
1.0
|
OD1
|
B:ASP179
|
4.3
|
0.6
|
1.0
|
CA
|
B:SER222
|
4.3
|
0.1
|
1.0
|
CB
|
B:ASP235
|
4.4
|
0.7
|
1.0
|
CA
|
B:TRP226
|
4.4
|
0.4
|
1.0
|
N
|
B:PRO223
|
4.4
|
0.9
|
1.0
|
OD1
|
B:ASP235
|
4.5
|
0.7
|
1.0
|
CA
|
B:PRO223
|
4.5
|
0.9
|
1.0
|
C
|
B:TRP226
|
4.5
|
0.4
|
1.0
|
C
|
B:PRO223
|
4.5
|
0.9
|
1.0
|
O
|
B:TRP226
|
4.5
|
0.4
|
1.0
|
CB
|
B:SER222
|
4.6
|
0.1
|
1.0
|
CB
|
B:ASP181
|
4.7
|
0.6
|
1.0
|
N
|
B:GLU224
|
4.7
|
0.8
|
1.0
|
CB
|
B:LYS225
|
4.7
|
0.1
|
1.0
|
CB
|
B:SER221
|
4.8
|
0.2
|
1.0
|
O
|
B:PRO223
|
4.9
|
0.9
|
1.0
|
C
|
B:GLU224
|
5.0
|
0.8
|
1.0
|
|
Calcium binding site 5 out
of 14 in 6psn
Go back to
Calcium Binding Sites List in 6psn
Calcium binding site 5 out
of 14 in the Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 5 of Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca801
b:0.5
occ:1.00
|
O
|
C:ILE183
|
2.1
|
0.6
|
1.0
|
OD2
|
C:ASP179
|
2.2
|
0.1
|
1.0
|
OD1
|
C:ASP179
|
2.3
|
0.1
|
1.0
|
OD1
|
C:ASP181
|
2.3
|
0.6
|
1.0
|
CG
|
C:ASP179
|
2.5
|
0.1
|
1.0
|
CG
|
C:ASP181
|
3.2
|
0.6
|
1.0
|
C
|
C:ILE183
|
3.3
|
0.6
|
1.0
|
OD2
|
C:ASP181
|
3.3
|
0.6
|
1.0
|
CG2
|
C:ILE183
|
3.6
|
0.6
|
1.0
|
OD1
|
C:ASP185
|
3.7
|
0.8
|
1.0
|
CA
|
C:CA802
|
3.7
|
0.5
|
1.0
|
O
|
C:PRO184
|
3.9
|
0.7
|
1.0
|
CB
|
C:ASP179
|
4.0
|
0.1
|
1.0
|
C
|
C:PRO184
|
4.1
|
0.7
|
1.0
|
CA
|
C:ILE183
|
4.1
|
0.6
|
1.0
|
CB
|
C:ILE183
|
4.2
|
0.6
|
1.0
|
N
|
C:ILE183
|
4.2
|
0.6
|
1.0
|
N
|
C:PRO184
|
4.3
|
0.7
|
1.0
|
O
|
C:SER222
|
4.4
|
0.3
|
1.0
|
CA
|
C:PRO184
|
4.4
|
0.7
|
1.0
|
CB
|
C:ASP177
|
4.4
|
0.5
|
1.0
|
CG1
|
C:ILE183
|
4.4
|
0.6
|
1.0
|
O
|
C:PRO223
|
4.5
|
0.5
|
1.0
|
N
|
C:ASP185
|
4.6
|
0.8
|
1.0
|
CB
|
C:ASP181
|
4.6
|
0.6
|
1.0
|
N
|
C:ASP181
|
4.7
|
0.6
|
1.0
|
CA
|
C:ASP185
|
4.7
|
0.8
|
1.0
|
CA
|
C:PRO223
|
4.7
|
0.5
|
1.0
|
CA
|
C:ASP177
|
4.8
|
0.5
|
1.0
|
N
|
C:ASP179
|
4.8
|
0.1
|
1.0
|
CA
|
C:ASP179
|
4.8
|
0.1
|
1.0
|
CB
|
C:GLU188
|
4.8
|
0.0
|
1.0
|
CG
|
C:ASP185
|
4.8
|
0.8
|
1.0
|
C
|
C:PRO223
|
4.8
|
0.5
|
1.0
|
N
|
C:ASN180
|
5.0
|
0.9
|
1.0
|
|
Calcium binding site 6 out
of 14 in 6psn
Go back to
Calcium Binding Sites List in 6psn
Calcium binding site 6 out
of 14 in the Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 6 of Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca802
b:0.5
occ:1.00
|
O
|
C:LYS225
|
2.2
|
0.7
|
1.0
|
O
|
C:SER222
|
2.3
|
0.3
|
1.0
|
OD2
|
C:ASP179
|
2.3
|
0.1
|
1.0
|
OD2
|
C:ASP235
|
2.3
|
0.5
|
1.0
|
OD2
|
C:ASP181
|
2.4
|
0.6
|
1.0
|
CG
|
C:ASP179
|
3.2
|
0.1
|
1.0
|
C
|
C:LYS225
|
3.3
|
0.7
|
1.0
|
CG
|
C:ASP181
|
3.5
|
0.6
|
1.0
|
C
|
C:SER222
|
3.5
|
0.3
|
1.0
|
CG
|
C:ASP235
|
3.6
|
0.5
|
1.0
|
CB
|
C:ASP179
|
3.6
|
0.1
|
1.0
|
CA
|
C:CA801
|
3.7
|
0.5
|
1.0
|
OG1
|
C:THR228
|
3.9
|
0.6
|
1.0
|
OD1
|
C:ASP181
|
3.9
|
0.6
|
1.0
|
N
|
C:LYS225
|
4.1
|
0.7
|
1.0
|
OG
|
C:SER221
|
4.1
|
0.9
|
1.0
|
N
|
C:TRP226
|
4.2
|
0.3
|
1.0
|
CA
|
C:LYS225
|
4.2
|
0.7
|
1.0
|
N
|
C:SER222
|
4.3
|
0.3
|
1.0
|
OD1
|
C:ASP179
|
4.3
|
0.1
|
1.0
|
CA
|
C:SER222
|
4.3
|
0.3
|
1.0
|
CB
|
C:ASP235
|
4.4
|
0.5
|
1.0
|
CA
|
C:TRP226
|
4.4
|
0.3
|
1.0
|
N
|
C:PRO223
|
4.4
|
0.5
|
1.0
|
OD1
|
C:ASP235
|
4.5
|
0.5
|
1.0
|
CA
|
C:PRO223
|
4.5
|
0.5
|
1.0
|
C
|
C:TRP226
|
4.5
|
0.3
|
1.0
|
C
|
C:PRO223
|
4.5
|
0.5
|
1.0
|
O
|
C:TRP226
|
4.5
|
0.3
|
1.0
|
CB
|
C:SER222
|
4.6
|
0.3
|
1.0
|
CB
|
C:ASP181
|
4.7
|
0.6
|
1.0
|
N
|
C:GLU224
|
4.7
|
0.9
|
1.0
|
CB
|
C:LYS225
|
4.7
|
0.7
|
1.0
|
CB
|
C:SER221
|
4.8
|
0.9
|
1.0
|
O
|
C:PRO223
|
4.9
|
0.5
|
1.0
|
C
|
C:GLU224
|
5.0
|
0.9
|
1.0
|
|
Calcium binding site 7 out
of 14 in 6psn
Go back to
Calcium Binding Sites List in 6psn
Calcium binding site 7 out
of 14 in the Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 7 of Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Ca801
b:0.5
occ:1.00
|
O
|
D:ILE183
|
2.1
|
1.0
|
1.0
|
OD2
|
D:ASP179
|
2.2
|
0.8
|
1.0
|
OD1
|
D:ASP179
|
2.3
|
0.8
|
1.0
|
OD1
|
D:ASP181
|
2.3
|
0.0
|
1.0
|
CG
|
D:ASP179
|
2.5
|
0.8
|
1.0
|
CG
|
D:ASP181
|
3.2
|
0.0
|
1.0
|
C
|
D:ILE183
|
3.3
|
1.0
|
1.0
|
OD2
|
D:ASP181
|
3.3
|
0.0
|
1.0
|
CG2
|
D:ILE183
|
3.6
|
1.0
|
1.0
|
OD1
|
D:ASP185
|
3.7
|
0.5
|
1.0
|
CA
|
D:CA802
|
3.7
|
0.1
|
1.0
|
O
|
D:PRO184
|
3.9
|
0.6
|
1.0
|
CB
|
D:ASP179
|
4.0
|
0.8
|
1.0
|
C
|
D:PRO184
|
4.1
|
0.6
|
1.0
|
CA
|
D:ILE183
|
4.1
|
1.0
|
1.0
|
CB
|
D:ILE183
|
4.2
|
1.0
|
1.0
|
N
|
D:ILE183
|
4.2
|
1.0
|
1.0
|
N
|
D:PRO184
|
4.3
|
0.6
|
1.0
|
O
|
D:SER222
|
4.4
|
1.0
|
1.0
|
CA
|
D:PRO184
|
4.4
|
0.6
|
1.0
|
CB
|
D:ASP177
|
4.4
|
0.4
|
1.0
|
CG1
|
D:ILE183
|
4.4
|
1.0
|
1.0
|
O
|
D:PRO223
|
4.5
|
0.5
|
1.0
|
N
|
D:ASP185
|
4.6
|
0.5
|
1.0
|
CB
|
D:ASP181
|
4.6
|
0.0
|
1.0
|
N
|
D:ASP181
|
4.7
|
0.0
|
1.0
|
CA
|
D:ASP185
|
4.7
|
0.5
|
1.0
|
CA
|
D:PRO223
|
4.7
|
0.5
|
1.0
|
CA
|
D:ASP177
|
4.8
|
0.4
|
1.0
|
N
|
D:ASP179
|
4.8
|
0.8
|
1.0
|
CA
|
D:ASP179
|
4.8
|
0.8
|
1.0
|
CB
|
D:GLU188
|
4.8
|
0.5
|
1.0
|
CG
|
D:ASP185
|
4.8
|
0.5
|
1.0
|
C
|
D:PRO223
|
4.8
|
0.5
|
1.0
|
N
|
D:ASN180
|
5.0
|
0.6
|
1.0
|
|
Calcium binding site 8 out
of 14 in 6psn
Go back to
Calcium Binding Sites List in 6psn
Calcium binding site 8 out
of 14 in the Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 8 of Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Ca802
b:0.1
occ:1.00
|
O
|
D:LYS225
|
2.2
|
0.1
|
1.0
|
O
|
D:SER222
|
2.3
|
1.0
|
1.0
|
OD2
|
D:ASP179
|
2.3
|
0.8
|
1.0
|
OD2
|
D:ASP235
|
2.3
|
0.1
|
1.0
|
OD2
|
D:ASP181
|
2.4
|
0.0
|
1.0
|
CG
|
D:ASP179
|
3.2
|
0.8
|
1.0
|
C
|
D:LYS225
|
3.3
|
0.1
|
1.0
|
CG
|
D:ASP181
|
3.5
|
0.0
|
1.0
|
C
|
D:SER222
|
3.5
|
1.0
|
1.0
|
CG
|
D:ASP235
|
3.6
|
0.1
|
1.0
|
CB
|
D:ASP179
|
3.6
|
0.8
|
1.0
|
CA
|
D:CA801
|
3.7
|
0.5
|
1.0
|
OG1
|
D:THR228
|
3.9
|
0.7
|
1.0
|
OD1
|
D:ASP181
|
3.9
|
0.0
|
1.0
|
N
|
D:LYS225
|
4.1
|
0.1
|
1.0
|
OG
|
D:SER221
|
4.1
|
0.3
|
1.0
|
N
|
D:TRP226
|
4.2
|
0.8
|
1.0
|
CA
|
D:LYS225
|
4.2
|
0.1
|
1.0
|
N
|
D:SER222
|
4.3
|
1.0
|
1.0
|
OD1
|
D:ASP179
|
4.3
|
0.8
|
1.0
|
CA
|
D:SER222
|
4.3
|
1.0
|
1.0
|
CB
|
D:ASP235
|
4.4
|
0.1
|
1.0
|
CA
|
D:TRP226
|
4.4
|
0.8
|
1.0
|
N
|
D:PRO223
|
4.4
|
0.5
|
1.0
|
OD1
|
D:ASP235
|
4.5
|
0.1
|
1.0
|
CA
|
D:PRO223
|
4.5
|
0.5
|
1.0
|
C
|
D:TRP226
|
4.5
|
0.8
|
1.0
|
C
|
D:PRO223
|
4.5
|
0.5
|
1.0
|
O
|
D:TRP226
|
4.5
|
0.8
|
1.0
|
CB
|
D:SER222
|
4.6
|
1.0
|
1.0
|
CB
|
D:ASP181
|
4.7
|
0.0
|
1.0
|
N
|
D:GLU224
|
4.7
|
0.2
|
1.0
|
CB
|
D:LYS225
|
4.7
|
0.1
|
1.0
|
CB
|
D:SER221
|
4.8
|
0.3
|
1.0
|
O
|
D:PRO223
|
4.9
|
0.5
|
1.0
|
C
|
D:GLU224
|
5.0
|
0.2
|
1.0
|
|
Calcium binding site 9 out
of 14 in 6psn
Go back to
Calcium Binding Sites List in 6psn
Calcium binding site 9 out
of 14 in the Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 9 of Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Ca801
b:0.8
occ:1.00
|
O
|
E:ILE183
|
2.1
|
0.1
|
1.0
|
OD2
|
E:ASP179
|
2.2
|
0.9
|
1.0
|
OD1
|
E:ASP179
|
2.3
|
0.9
|
1.0
|
OD1
|
E:ASP181
|
2.3
|
0.8
|
1.0
|
CG
|
E:ASP179
|
2.5
|
0.9
|
1.0
|
CG
|
E:ASP181
|
3.2
|
0.8
|
1.0
|
C
|
E:ILE183
|
3.3
|
0.1
|
1.0
|
OD2
|
E:ASP181
|
3.3
|
0.8
|
1.0
|
CG2
|
E:ILE183
|
3.6
|
0.1
|
1.0
|
OD1
|
E:ASP185
|
3.7
|
0.2
|
1.0
|
CA
|
E:CA802
|
3.7
|
0.5
|
1.0
|
O
|
E:PRO184
|
3.9
|
0.1
|
1.0
|
CB
|
E:ASP179
|
4.0
|
0.9
|
1.0
|
C
|
E:PRO184
|
4.1
|
0.1
|
1.0
|
CA
|
E:ILE183
|
4.1
|
0.1
|
1.0
|
CB
|
E:ILE183
|
4.2
|
0.1
|
1.0
|
N
|
E:ILE183
|
4.2
|
0.1
|
1.0
|
N
|
E:PRO184
|
4.3
|
0.1
|
1.0
|
O
|
E:SER222
|
4.4
|
0.7
|
1.0
|
CA
|
E:PRO184
|
4.4
|
0.1
|
1.0
|
CB
|
E:ASP177
|
4.4
|
0.2
|
1.0
|
CG1
|
E:ILE183
|
4.4
|
0.1
|
1.0
|
O
|
E:PRO223
|
4.5
|
0.3
|
1.0
|
N
|
E:ASP185
|
4.6
|
0.2
|
1.0
|
CB
|
E:ASP181
|
4.6
|
0.8
|
1.0
|
N
|
E:ASP181
|
4.7
|
0.8
|
1.0
|
CA
|
E:ASP185
|
4.7
|
0.2
|
1.0
|
CA
|
E:PRO223
|
4.7
|
0.3
|
1.0
|
CA
|
E:ASP177
|
4.8
|
0.2
|
1.0
|
N
|
E:ASP179
|
4.8
|
0.9
|
1.0
|
CA
|
E:ASP179
|
4.8
|
0.9
|
1.0
|
CB
|
E:GLU188
|
4.8
|
0.1
|
1.0
|
CG
|
E:ASP185
|
4.8
|
0.2
|
1.0
|
C
|
E:PRO223
|
4.8
|
0.3
|
1.0
|
N
|
E:ASN180
|
5.0
|
0.5
|
1.0
|
|
Calcium binding site 10 out
of 14 in 6psn
Go back to
Calcium Binding Sites List in 6psn
Calcium binding site 10 out
of 14 in the Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 10 of Anthrax Toxin Protective Antigen Channels Bound to Lethal Factor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Ca802
b:0.5
occ:1.00
|
O
|
E:LYS225
|
2.2
|
0.9
|
1.0
|
O
|
E:SER222
|
2.3
|
0.7
|
1.0
|
OD2
|
E:ASP179
|
2.3
|
0.9
|
1.0
|
OD2
|
E:ASP235
|
2.3
|
0.5
|
1.0
|
OD2
|
E:ASP181
|
2.4
|
0.8
|
1.0
|
CG
|
E:ASP179
|
3.2
|
0.9
|
1.0
|
C
|
E:LYS225
|
3.3
|
0.9
|
1.0
|
CG
|
E:ASP181
|
3.5
|
0.8
|
1.0
|
C
|
E:SER222
|
3.5
|
0.7
|
1.0
|
CG
|
E:ASP235
|
3.6
|
0.5
|
1.0
|
CB
|
E:ASP179
|
3.6
|
0.9
|
1.0
|
CA
|
E:CA801
|
3.7
|
0.8
|
1.0
|
OG1
|
E:THR228
|
3.9
|
0.4
|
1.0
|
OD1
|
E:ASP181
|
3.9
|
0.8
|
1.0
|
N
|
E:LYS225
|
4.1
|
0.9
|
1.0
|
OG
|
E:SER221
|
4.1
|
0.5
|
1.0
|
N
|
E:TRP226
|
4.2
|
0.7
|
1.0
|
CA
|
E:LYS225
|
4.2
|
0.9
|
1.0
|
N
|
E:SER222
|
4.3
|
0.7
|
1.0
|
OD1
|
E:ASP179
|
4.3
|
0.9
|
1.0
|
CA
|
E:SER222
|
4.3
|
0.7
|
1.0
|
CB
|
E:ASP235
|
4.4
|
0.5
|
1.0
|
CA
|
E:TRP226
|
4.4
|
0.7
|
1.0
|
N
|
E:PRO223
|
4.4
|
0.3
|
1.0
|
OD1
|
E:ASP235
|
4.5
|
0.5
|
1.0
|
CA
|
E:PRO223
|
4.5
|
0.3
|
1.0
|
C
|
E:TRP226
|
4.5
|
0.7
|
1.0
|
C
|
E:PRO223
|
4.5
|
0.3
|
1.0
|
O
|
E:TRP226
|
4.5
|
0.7
|
1.0
|
CB
|
E:SER222
|
4.6
|
0.7
|
1.0
|
CB
|
E:ASP181
|
4.7
|
0.8
|
1.0
|
N
|
E:GLU224
|
4.7
|
0.4
|
1.0
|
CB
|
E:LYS225
|
4.7
|
0.9
|
1.0
|
CB
|
E:SER221
|
4.8
|
0.5
|
1.0
|
O
|
E:PRO223
|
4.9
|
0.3
|
1.0
|
C
|
E:GLU224
|
5.0
|
0.4
|
1.0
|
|
Reference:
N.J.Hardenbrook,
S.Liu,
K.Zhou,
K.Ghosal,
Z.Hong Zhou,
B.A.Krantz.
Atomic Structures of Anthrax Toxin Protective Antigen Channels Bound to Partially Unfolded Lethal and Edema Factors. Nat Commun V. 11 840 2020.
ISSN: ESSN 2041-1723
PubMed: 32047164
DOI: 10.1038/S41467-020-14658-6
Page generated: Tue Jul 16 12:58:52 2024
|